The largest database of trusted experimental protocols

Anti hnf4α

Manufactured by Santa Cruz Biotechnology
Sourced in China, United States

Anti-HNF4α is a laboratory reagent used in research applications. It is an antibody that specifically recognizes and binds to the HNF4α protein. HNF4α is a transcription factor that plays a crucial role in the regulation of gene expression in various cell types. The Anti-HNF4α reagent can be used to detect and study the expression and localization of HNF4α in biological samples.

Automatically generated - may contain errors

6 protocols using anti hnf4α

1

Hepatoma Cell Culture Optimization

Check if the same lab product or an alternative is used in the 5 most similar protocols
PLC/PRF/5, human hepatoma cell line was obtained from the American Type Culture Collection (Rockville, MD). The cells were cultured in low glucose (5.5 mM) or high glucose (25 mM) Dulbecco's modified Eagle's medium (DMEM) containing 10% fetal bovine serum (FBS; Gibco) and antibiotic. Mito Tracker Green and Mito Tracker red CMXRos were obtained from Invitrogen. Sodium lactate and sodium dichloroacetate were obtained from Sigma-Aldrich. The antibodies obtained were: anti-CD133/1 (AC133)-PE and anti-CD133 (W6B3C1) pure (Miltenyi Biotec), anti-HNF4α (Santa Cruz Biotechnology), anti-HNF1α and anti-HNF3α (Millipore), anti-HNF1β (Genway), anti-PDK4 (ABGENT), and anti-β-actin (Sigma). Synthetic siRNAs against LDHA and PDK4, miR-122, U6 primers and mimic were obtained from Qiagen. Cells were transfected at a final concentration of 50 nM siRNA or 20 nM of miR-122 mimic using Oligofectamine reagent (Invitrogen) according to the manufacturer's instructions. The lentiviral particle expressing miR-122 and lentiviral negative control mimic were obtained from GenCopoiea.
+ Open protocol
+ Expand
2

Intracellular Protein Quantification in Hepatocytes

Check if the same lab product or an alternative is used in the 5 most similar protocols
For intracellular staining of ALB and AAT, the cells were fixed with 4 % paraformaldehyde for 15 minutes at room temperature and then incubated with PBS containing 0.2 % Triton X-100 (Sigma) for 15 minutes. Cells were then washed three times with PBS. After being blocked by 3 % bovine serum albumin (BSA) in PBS for 60 minutes at room temperature, cells were incubated with primary antibodies at 4 °C overnight, washed three times with PBS, and then incubated with appropriate fluorescence-conjugated secondary antibody for 60 minutes at 37 °C in the dark. Nuclei were stained with 4',6-diamidino-2-phenylindole (DAPI; Sigma). Primary and secondary antibodies were diluted in PBS containing 3 % BSA. Antibodies used for immunofluorescence are as follows: sheep anti-ALB (1:500; Bethyl), rabbit anti-AAT (1:1; Abcam, Chengdu, Sichuan, P.R. China), rabbit anti-hepatocyte nuclear factor alpha-4 (anti-HNF4α, 1:50; Santa Cruz), rabbit anti-Ki67 (1:100; Santa Cruz), dylight 488 conjugated donkey anti-rabbit IgG (1:200; Bethyl), dylight 594 conjugated donkey anti-sheep IgG (1:200; Bethyl), and Alexa Fluor 594 conjugated goat anti-rabbit IgG (1:100; ZSBG-BIO, Chengdu, Sichuan, P.R. China).
+ Open protocol
+ Expand
3

Western Blot Analysis of Hepatic Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
The harvested cells and obtained tissues were lysed by RIPA buffer [20 mM Tris/HCl, 1% NP-40, 0.5% phosphatase inhibitor cocktail (Sigma, St Luis, MO, USA), 150 mM NaCl, 2 mM KCl, pH 7.4]. The debris was removed by centrifuging at 12000 RPM for 20 min. After the filtering of cell debris, levels of protein in the lysate were quantified by a BCA protein assay kit (Thermo Fisher scientific, Waltham, MA, USA). The samples were mixed with 5X SDS sample buffer and boiled at 95 °C for 4 min. The proteins were separated by SDS-PAGE and transferred to polyvinylidene fluoride (PVDF) membrane (Millipore, Burlington, MA, USA). The transferred membranes were washed with TBS-T. Antibodies were used in 1:2000 ratios. The primary antibodies used were as follows: anti-HNF4α (Santa Cruz, CA, USA), anti-HNF1α (Santa Cruz), anti-HNF3β (Santa Cruz), anti-C/EBPα (Santa Cruz), anti-HBcAg (Dako, Glostrup, Denmark), anti-HBx protein (Abcam, UK), anti-p-ERK (Cell Signaling Technology, MA), anti-ERK (Cell Signaling Technology), anti-p-AKT (Cell Signaling Technology), anti-AKT (Cell Signaling Technology), anti-p-JNK (Cell Signaling Technology), anti-JNK (Cell Signaling Technology), anti-p-p38 (Cell Signaling Technology), anti-p38 (Cell Signaling Technology), anti-β-actin (Sigma-Aldrich Co, St Louis, MO, USA).
+ Open protocol
+ Expand
4

Nuclear Protein Extraction from HepG2 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
To prepare nuclear extracts HepG2 cells were lysed with hypotonic buffer, pellet were resuspended with 500 μl of PIPES buffer [5 mM PIPES (piperazine N,N bis zethone sulfonic acid) pH 8, 85 mM KCl, 0,5% NP40] plus protease inhibitor cocktail (PIC, Sigma p8340) and left 10 min on ice. The nuclei were separated by centrifuge at 10.000 g for 5 minute a 4°C. Nuclei were lysed with RIPA buffer (50 mM Tris-HCL ph8, 150 mM NaCl, 1% NP40, 0,5% sodium deoxycolate, 0.1% SDS). Total protein extracts were obtained by lysing the cells directly the with RIPA buffer. Protein concentrations were determined using the Bradford Protein Assay Reagent (Biorad). Protein lysates were separated by SDS-PAGE gels, transferred to nitrocellulose membranes and incubated with the following antibodies: anti-HNF1α (Santa Cruz Biotechnology, #sc6547), anti-HNF4α (Santa Cruz Biotechnology, #sc6556), anti-STAT3 (Cell signaling, #9139), anti-phospho-STAT3 (Cell signaling #9131), laminB (Santa Cruz Biotechnology, #sc6216) and β-actin (Santa Cruz Biotechnology, #sc1616).
+ Open protocol
+ Expand
5

Immunohistochemical Analysis of Liver Tissues

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunohistochemistry was carried out using 5μm paraffinembedded sections of mouse or human liver tissues using the universal animal IHC kit (Lot: KT4418A, Innovex) according to the manufactureŕs instructions. The primary antibody of anti-CK19 (Abcam, ab52625), anti-HNF-4α (Santa Cruz, sc-374229), anti-Ly6G (clone 1A8, BioxCell for Figs. 2D and 2F, BD Biosciences for supplementary Fig. 2G), anti-MPO (Biocare Medical, Catalog Number: PP023AA), anti-CD15 (DAKO, M3631), anti-Lipopolysaccharide Core, mAb WN1 222–5 (HycultBiotech, Cat#HM6011; RRID:AB_2750644) was used. ImageJ software was used to count the positive staining cells.
+ Open protocol
+ Expand
6

Western Blot Analysis of Liver Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Proteins were extracted following the procedure described previously (22 (link)). The proteins were separated by SDS-PAGE on 8–12% polyacrylamide gels and subsequently electrically transferred to a PVDF membrane. After blocking with 5% (w/v) BSA in TBST at room temperature for 1 h, the membranes were then incubated with an appropriate specific primary antibody (anti-CYP7A1, Santa Cruz, Cat# sc-518007, 1:500; anti-PER1, Sigma-Aldrich, Cat# AB2201, 1:200; anti-CYP8B1, Santa Cruz, Cat# sc-101387,1:500; anti-CYP27A1, Santa Cruz, Cat# sc-390974,1:500; anti-HNF-4α, Santa Cruz, Cat# sc-101059,1:500; anti-PKA-C, Santa Cruz, Cat# sc-365615,1:500; anti-PKA-R, Santa Cruz, Cat# sc-271125,1:500; anti-β-actin, BioWorld, Cat# AP0060, 1:1000; anti-p-Ser, Santa Cruz, Cat# sc-81514) at 4°C overnight, followed by incubation with an HRP-conjugated secondary antibody (1:4000). Detection was performed using an enhanced chemiluminescence kit (Thermo Scientific, Hudson, NH).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!