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6 protocols using pe cy7 conjugated anti cd4

1

Isolation and Characterization of Murine Lymphocytes

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At the end of the experimental period, the animals were sacrificed and spleens were collected and harvested aseptically. Next, the tissue was gently smashed between two microscopic glass slides and filtered through cell strainers to prepare single cell suspension. After lysis of RBCs, suspension was washed with sterilized PBS. And this washing step was repeated for 3 times. Finally, the cell concentration of the suspension was adjusted to a concentration of 1.0 × 107/mL for flow cytometry analysis. Now, the prepared cell suspension was incubated with required volume of each of the fluorescently labeled antibodies for 30 min at 4°C to detect lymphocyte subgroups. Before analysis, solution is washed three times with PBS. The stained cells were then analyzed by flow cytometry immediately (FC500, Beckman, USA). Fluorescently labeled antibodies included FITC-conjugated anti-CD3e, PE-Cy7 conjugated anti-CD4, APC-H7 conjugated anti-CD8a, PE conjugated anti-CD18, PerCP-Cy 5.5 conjugated CD45, and APC conjugated anti-CD19 (BD Biosciences, USA).
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2

Multiparametric Flow Cytometry Assay

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Negatively isolated CD3+ T cells were stained with PE Cy7-conjugated anti-CD4 and PerCP Cy5.5-conjugated anti-CD8 with or without phycoerythrine (PE) or brilliant violet 510 (BV510)-conjugated anti-CD25 (all from BD Biosciences). The cells were permeabilized as per the manufacturer’s instructions and stained with Alexa Fluor (AF)-488 or AF-647 conjugated anti-pS6RP to assess mTORC1 (Cell signaling, Danvers, MA), violet 450 (V450) conjugated anti-pAkt to assess mTORC2 (BD Biosciences), AF-647-conjugated anti-FoxP3 (Biolegend, San Diego, CA), and PE-conjugated anti-GATA-3 (eBioscience). For cytokine detection, FITC-conjugated anti-IFN-γ, allophycocyanin (APC) conjugated anti-IL-4, and PE-conjugated anti-IL-17 were used alone or together. For intracellular cytokine staining, cells were pre-incubated with phorbol myristate acetate (PMA, 5 ng/ml) and ionomycin (500 ng/ml) for 6 hours and with brefeldin A for 5 hours (10 µg/ml; all from Sigma-Aldrich). Isotype control antibodies included FITC-conjugated mouse IgG1, PE-conjugated mouse IgG1 kappa, PE conjugated rat IgG2b kappa, BV510 conjugated mouse IgG1, V450 conjugated mouse IgG1, and APC-conjugated mouse IgG1. All isotype control antibodies were obtained from BD Biosciences except for PE conjugated rat IgG2b kappa, which was obtained from eBioscience.
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3

Isolation and Characterization of Regulatory T Cells

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Peripheral blood mononuclear cells (PBMCs) were isolated by using Ficoll Histopaque gradient (GE Health Care Bio-Sciences). CD3+ T cells were isolated by negative selection using untouched human T cell isolation kit (Life technologies, Cat# 11344D). Purity of CD3+ T cells was confirmed to be above 97%. Cells were cultured in RPMI culture media with 10% FCS, 1% Penicillin/Streptomycin, and 1% L-glutamine (all from Corning CellGro except for FCS, which was from Gibco) for 3 days, and stained with PE Cy7-conjugated anti-CD4 (Clone: SK3, Cat# 557852, RRID : AB_396897) and phycoerythrine (PE)-conjugated anti-CD25 (Clone: M-A251, Cat# 555432, RRID : AB_395826, both from BD Biosciences). The cells were permeabilized as per the manufacturer’s instructions and stained with AF-647-conjugated anti-FoxP3 (Biolegend, Clone: 150D, Cat# 320014, RRID : AB_439750).
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4

Flow Cytometric Analysis of Immune Cells

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For flow cytometry analysis, cell suspensions were incubated in FACS staining buffer (PBS containing 1% BSA) and subsequently stained for 30 min at 4 °C with an optimized concentration of antibodies (BD Bioscience, Franklin Lakes, NJ, USA): PE-conjugated anti-CD3, PerCPCy5.5-conjugated anti-CD8, PE Cy7-conjugated anti-CD4, PerCPCy5.5-conjugated anti-CD45, APC-conjugated anti-CD11c and PE-conjugated anti-SiglecF to determine cell types in the BAL. Cells were acquired on an LSRII flow cytometer (BD Bioscience) and the data were analyzed using the FlowJo software (v 7.6.5; Ashland, OR, USA). Based on surface marker expression, six different cell types were identified: CD45+ (total leukocytes), CD45+SiglecF+CD11clow (eosinophils), CD45+SiglecF+CD11chigh (alveolar macrophages), CD45+CD3+ (total T cells), CD4 T cells (CD45+CD3+CD4+) and CD8 T cells (CD45+CD3+CD8+).
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5

Th17 and Treg Cells Immunophenotyping

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The following antibodies were used for mouse cells; Th17 cells: PerCP-Cy5.5-conjugated anti-CD4 (eBioscience) and FITC conjugated anti-IL-17A (eBioscience) was used for intracellular staining. The following antibodies were used for human cells: Th17 and Treg cells were from PE-Cy7-conjugated anti-CD4, APC- conjugated anti-CD25 (both from BD Pharmingen), and FITC-conjugated anti-Foxp3, PE-conjugated anti-IL-17 (both from eBioscience).
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6

Multiparameter Flow Cytometry Analysis

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To separate live and dead cell populations, PBMCs were stained with Live/Dead fixable stain dye (Life Technologies, Carlsbad, CA, USA). Then, the cells were washed in PBS and incubated with PerCP-Cy5.5-conjugated anti-CD3 (eBioscience, San Diego, CA, USA), PE-Cy7-conjugated anti-CD4 (BD Biosciences, Franklin Lakes, NJ, USA), APC-Cy7-conjugated anti-CD8 (BD Biosciences), and V450-conjugated anti-CD25 (BD Biosciences). Following fixation and permeabilization using the FOXP3/Transcription Factor Staining Buffer Set (eBioscience), the cells were stained with Alexa647-conjugated anti-FOXP3 (BD Biosciences) and Alexa488-conjugated-IL-17A (BD Biosciences) or PE-conjugated-IL-17A (BD Biosciences). CellROX Green Oxidative Stress Reagents (Molecular Probes, Eugene, OR, USA) or MitoSOX Red Mitochondrial Superoxide Indicator (Invitrogen, Carlsbad, CA, USA) were used for ROS detection. The cells were analyzed with a FACSCantoII flow cytometer (BD Biosciences), and data were processed with FlowJo software (Tree Star, OR, USA).
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