The largest database of trusted experimental protocols

2 protocols using camk2

1

Single-molecule FISH for miRNA in Hippocampus

Check if the same lab product or an alternative is used in the 5 most similar protocols
Single‐molecule fluorescence in situ hybridization for miRNA detection on hippocampal cultures was performed using the QuantiGene ViewRNA miRNA Cell Assay Kit (Thermo Fisher) according to the manufacturer's protocol with slight modifications. To preserve dendrite morphology, protease treatment was reduced to a dilution of 1:10,000 in PBS for 45 s. The probes hsa‐miR‐499a‐5p (Alexa Fluor 546; Thermo Fisher) and CamK2 (Alexa Fluor 488; Thermo Fisher) were used for smFISH.
+ Open protocol
+ Expand
2

Protein Extraction and Western Blotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
After washing with cold phosphate-buffered saline (PBS), tissues and cells were homogenized with a mixture of pH 7.4 RIPA buffer (1% Triton X-100, 10 mM Tris, 150 mM NaCl, 1 mM EGTA, 1 mM EDTA) and protease inhibitor, and centrifuged at 8,000 rpm for 5 min at 4°C. A bicinchoninic acid (BCA) kit (Thermo Fisher Scientific, Waltham, MA, United States) was used to measure the extracted proteins. Proteins were electrophoresed using 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto nitrocellulose (NC) membranes. NC membranes were blocked with 5% milk dissolved in Tris-buffered saline (TBS) for 30 min. They were then incubated with primary antibodies against DAPK1 (Cell Signaling Technology, 1:1,000), DM1A (Abcam, 1:2,000), caspase-3 (Cell Signaling Technology, 1:1,000), cleaved caspase-3 (Cell Signaling Technology, 1:500), p35/25 (Cell Signaling Technology, 1:1,000), ERK1/2 (Cell Signaling Technology, 1:1,000), p-ERK1/2 (Cell Signaling Technology, 1:1,000), CaMK2 (Thermo Fisher Scientific, 1:1,000), and p-CaMK2 (Thermo Fisher Scientific, 1:1,000) at 4°C overnight. This was then followed by incubation with anti-mouse or anti-rabbit IgG conjugated to IRDye® 800 CW (Li-Cor Bioscience, Lincoln, NE, United States, 1:10,000) at 37°C for 1 h. NC membranes were visualized using the Odyssey Infrared Imaging System (Li-Cor Bioscience, United States).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!