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Bl21 de3 cells

Manufactured by Transgene
Sourced in China

BL21 (DE3) cells are a commonly used bacterial strain for protein expression. They are genetically engineered E. coli cells designed to facilitate high-level expression of recombinant proteins under the control of the T7 RNA polymerase system. These cells provide a simple and efficient system for the production of a wide range of proteins.

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8 protocols using bl21 de3 cells

1

Characterizing SARS-CoV-2 Variants by Luciferase Assay

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The prokaryotic expression vector pET28a was preserved in our laboratory. Competent E. coli. Trans1 T1 and BL21 (DE3) cells were purchased from Beijing TransGen Biotech Co., Ltd. (China). Anti-SARS-CoV RBD antibody was obtained from Sino Biological Inc. Anti-Rabbit IgG (H + L) X-Adsorbed-horseradish peroxidase (HRP) (Sigma-Aldrich Lot: R133652). Goat pAb to Ms. IgG1 (HRP) (Lot: GR3320187–9), goat pAb to Ms. IgG2a (HRP) (Lot: GR3324477–8), goat pAb to Ms. IgG2b (HRP) (Lot: GR3342724–4), and goat pAb to Ms. IgG3 (HRP) (Lot: GR3285205–10) were obtained from Abcam (USA). The molecular weight protein markers were purchased from Solarbio (China). The DNA extraction kit was purchased from Thermo Fisher Scientific (USA). SARS-CoV-2-Fluc wild type (WT), Delta, and Omicron were purchased from Vazyme Biotech Co., Ltd. (China).
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2

Recombinant RBD Protein Expression

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E. coli BL21 (DE3) cells (TransGen) were transformed with the RBD construct. The cells were plated on LB agar containing kanamycin (50 μg mL−1) and were grown overnight at 37 °C. The strains were incubated at 37 °C in liquid LB medium with 50 μg mL−1 kanamycin, with shaking until the OD600 values were 0.6–0.8. Isopropyl β-D-1 galactopyranoside (IPTG) was added to 0.5 mmol L−1 and the strains were further induced for 6 h. The expression of the recombinant RBD fusion proteins was evaluated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and western blotting.
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3

Heterologous Expression and Purification of SFB Flagellin Proteins

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Heterologous expression, extraction, and purification of SFB-mFliC3, SFB-rFliC3, SFB-m5i-FliC3, and sal-FliC3 were performed as described elsewhere (31 (link)). Briefly, the QIAamp Fast DNA Stool Mini Kit (Qiagen, Germany) was used to extract rat and mouse bacterial genomic DNA. The SFB-specific PCR primers 779F and 1008R were used to detect SFB DNA (32 (link)). Furthermore, on the basis of the conserved region in the SFB flagellin gene sequences obtained in our previous study, we designed a pair of SFB fliC3-specific primers, fliC3 F and fliC3 R. SFB fliC3 genes were subcloned into the pET-28a vector. Then, IPTG (Sangon Biotech, China) was added to overexpress FliC3 proteins in chemically competent BL21(DE3) cells (Transgen Biotech, Beijing, China). BugBuster master mix (Merck Millipore, Germany) was used to extract total bacterial proteins, a His Bind purification kit (Merck Millipore, Germany) was employed to purify SFB FliC3 proteins, and Pierce™ High Capacity Endotoxin Removal Spin Columns (Thermo Scientific™, USA) were used to eliminate endotoxins in the protein samples. A bicinchoninic acid (BCA) protein assay kit (Beyotime Biotechnology, China) was used to determine the protein concentrations.
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4

Recombinant Goldfish MCSF-2 Protein Expression

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Goldfish MCSF-2 ORF excluding singnal peptide was amplified by PCR using gene-specific primers that included 5’-end BamH I and Hind III insertions (Table S1). Restriction enzymes BamH I and Hind III were used to thoroughly digest the PCR result. (Thermo Fisher Scientific, USA), then ligated to the pET32a (+) vector digested with BamH I/Hind III. This resulted in the creation of the recombinant plasmid pET32a-gfMCSF-2, which were subsequently converted into competent E. coli (BL21/DE3) cells (TransGen, China). To express the RgMCSF-2 proteins, 0.1 mM IPTG induction was carried out at 16°C overnight, and recombinants proteins expression was analyzed by SDS-PAGE. Purification of the recombinant protein was accomplished by using Ni-NTA Sefinose Resin (Sangon, China) as directed by the manufacturer. As a control protein in subsequent experiments, the pET32a (+) vector containing a thioredoxin tag without an insert was expressed and purified in the same manner. Subsequently, a ProteoSpin Endotoxin removal column (Norgen Biotek, USA) was used to purify the recombinant protein after it was dialyzed overnight at 4°C in 1 x PBS. Micro BCA Protein Assay Kit (Beyotime, China) was used to determine protein content.
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5

Silkworm Genetics and Cell Line Maintenance

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B. mori strain p50 was used in this study. G. pyloalis was collected in the mulberry field of Anhui Agricultural University. Larvae were reared on fresh mulberry leaves at 25–26 °C under a 12:12 h (L:D) photoperiod with 70% relative humidity. The silkworm ovary-derived BmN cells were routinely maintained at 27 °C in TC100 medium (Ximeijie, China) supplemented with 10% fetal bovine serum (ExCell, Shanghai, China) and 1% penicillin-streptomycin (Solarbio, Beijing, China) in our laboratory. The expression vector pET-24b was purchased from Invitrogen. The pET24b-BmSuc1 recombinant plasmid and the pFastBac-dual vector are always reserved in our laboratory. The E. coli strain BL21 (DE3) cells and DH10Bac (BmNPV) cells were purchased from Transgene Biotech (Beijing, China).
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6

Heterologous Expression of P450Bsβ Variant

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Escherichia. coli strain BL21(DE3) cells (used for gene expression) and TOP10 cells (used for molecular cloning) were purchased from TransGen Ltd. (China) The gene P450BsβHI (derived from P450Bsβ (NCBI Reference Sequence: WP_119898938.1) with a Q85H/V170I mutagenesis) was synthesized by Inovogen Ltd. (China). Fast Mutagenesis kit was from Vazyme Biotech Co., Ltd (China). Plasmid extraction kits and gel extraction kits were obtained from Omega Bio-tek (USA). Capric acid, lauric acid, myristic acid, stearic acid, undecene and tridecene were purchased from BioRo Yee Ltd. (China). All chemicals used were of analytical grade.
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7

Cloning and Purification of GST-IDO1

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The GST-IDO1 gene was cloned by Shanghai Generay Biotech Co. Ltd (Shanghai, China). The BL21(DE3) cells were obtained from TransGen Biotech Co. Ltd (Shanghai, China). Ampicillin, isopropyl β-D-thiogalactoside (IPTG), 5-Aminolevulinic acid (5-ALA), phenylmethanesulfonyl fluoride (PMSF), DNase I (from bovine pancreas), reduced glutathione, L-tryptophan, ascorbic acid, methylene blue, catalase, and sodium dithionite were obtained from Sangon Biotech (Shanghai, China) Co. Ltd. DMSO was purchased from Sigma-Aldrich. The CCK8 kit was purchased from Beyotime Biotechnology Co. Ltd.(Shanghai, China). Glutathione agarose beads were purchased from Changzhou Smart-Lifesciences Biotechnology Co. Ltd. (Changzhou, China) PD-10 desalting column was purchased from GE Healthcare Biosciences. HRV 3C Protease was purchased from Sino Biological Inc. (Shanghai, China). Cancer cell lines were purchased from the Cell Bank of Chinese Academy of Sciences. The experimental compounds were provided by Professor Zhao (Shanghai Institute of Organic Sciences, Chinese Academy of Sciences). All chemicals of analytical and reagent grade were obtained from commercial sources and used without further purification.
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8

Recombinant Dy10-m619SN Protein Expression

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The Dy10-m619SN gene sequence was re-ampli ed using the F3/R3 primer pair (Table S4) to remove the signal peptide sequence and to add NdeI and XhoI restriction sites. The PCR product was inserted into the pET-30a bacterial expression vector. The recombinant plasmid was inserted into E. coli strain BL21 (DE3) cells (TransGen Biotech, Beijing, China). Gene expression was induced by adding 1 mM isopropyl β-Dthiogalactopyranoside (IPTG) to the bacterial culture, which was incubated for 5 h until the OD 600 reached 0.6. The expressed proteins were extracted by a centrifugation at 13,800 g for 5 min and then separated by SDS-PAGE. Additionally, the nucleotide sequence encoding the N-Dy10-m619SN deduced amino acid sequence was ampli ed using the F4/R4 primer pair (Table S4) and then inserted into pET-30a for the subsequent expression in E. coli as described above.
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