The largest database of trusted experimental protocols

Lsm5 meta

Manufactured by Zeiss
Sourced in Germany

The LSM5 meta is a high-performance laser scanning microscope designed for advanced imaging applications. It features a range of specialized optical components and integrated software to enable precise, high-resolution imaging of samples. The core function of the LSM5 meta is to provide researchers with a powerful tool for conducting detailed, non-invasive analysis of biological and materials science specimens.

Automatically generated - may contain errors

9 protocols using lsm5 meta

1

EDB-FN Targeting Ability of APT_EDB

Check if the same lab product or an alternative is used in the 5 most similar protocols
To test the EDB-FN targeting ability of the APTEDB (AnyGen, Gwangju, Korea), cells were grown on 8-well chamber slides and treated with Cy3.3-labeled APTEDB (6 μg/ml) in Opti-MEM (Invitrogen) for 6 h. After incubation, the cells were rinsed in PBS three times and fixed with 2% (w/v) paraformaldehyde. To detect EDB-FN protein, the fixed cells were incubated with primary antibodies directed towards EDB-FN and visualized with Alex 488-conjugated secondary antibodies (Invitrogen). 4'6-diamidino-2-phenylindole (DAPI, Invitrogen) was used to visualize the cell nuclei. The fluorescence images were scanned and analyzed using a confocal laser microscope (LSM 5 META, Carl Zeiss, Jena, Germany).
+ Open protocol
+ Expand
2

Integrin-αV and Phospho-FAK Visualization

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cells were seeded on sterile cover slips in 24-well plates. Then, the cells were fixed using a 4 % paraformaldehyde solution (Affymetrix, Cleveland, OH, USA). Primary antibodies directed against integrin-αV (Santa Cruz Biotechnology) and phospho-FAK (Invitrogen) were applied overnight at 4 °C. The bound integrin-αV and phospho-FAK antibodies were visualized using secondary antibodies conjugated to Alexa 594, and the nuclei were counterstained using 4',6-diamidino-2-phenylindole (DAPI). All multicolor fluorescence images were obtained using a confocal laser-scanning microscopy (LSM5 Meta) (Carl Zeiss, Oberkochen, Germany).
+ Open protocol
+ Expand
3

Neurogenic Differentiation of hPDLSCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
For neurogenic differentiation, hPDLSCs and MS-hPDLSCs were plated in 24-well plates and were induced with Neurobasal-A Medium (Gibco®) containing B27 (2%), L-glutamine (2 mM), penicillin (100 U/ml), streptomycin (100 mg/ml), and amphotericin B (5 mg/ml) (neuroinductive medium) and supplemented with basic fibroblast growth factor (bFGF, 20 ng/ml) (Tema Ricerca, Milan, Italy) for 10 days [13 (link)]. To evaluate the differentiation, cells were processed for βIII-tubulin immunostaining detection and were observed using confocal laser scanning microscopy (LSM5META, Zeiss, Jena, Germany).
+ Open protocol
+ Expand
4

Fluorescence Microscopy for Antigen-Specific Localization

Check if the same lab product or an alternative is used in the 5 most similar protocols
To detect the antigen specific localization of IR700 conjugates, fluorescence microscopy was performed (IX61 or IX81; Olympus America, Melville, NY, USA). Ten thousand cells were seeded on cover-glass-bottomed dishes and incubated for 24 hr. APC was then added to the culture medium at 10 μg/mL and incubated at 37°C for 6 hr. The cells were then washed with PBS; Propidium Iodide (PI)(1:2000)(Life Technologies) and Cytox Blue (1:500)(Life Technologies), were used to detect dead cells. These were added to the media 30 min before observation. The cells were then exposed to NIR light and serial images were obtained. The filter was set to detect IR700 fluorescence with a 590–650 nm excitation filter, and a 665–740 nm band pass emission filter.
3D reconstructions of the spheroids were obtained with a confocal laser microscope (LSM5 meta, Carl Zeiss, Jena, Germany) after incubation for 30 min with Hoechst 33342 (1:500)(Life Technologies). Sections of spheroids were first fixed with 3.7% formaldehyde in PBS for 10 min at room temperature followed by embedding with OCT (SAKURA, Tokyo, Japan). Then, they were frozen at −80°C, cryotomed to obtain 10μm sections (LEICA CM3050 S, Leica microsystems, Wetzlar, Germany). Analysis of the images was performed with ImageJ software (http://rsb.info.nih.gov/ij/).
+ Open protocol
+ Expand
5

Visualizing miR-200a Delivery and Targets

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were seeded onto sterile cover slips and placed in 24-well plates. miR-200a-MB-MNPs or scrambled molecular beacon-conjugated MNPs (scrambled-MB-MNPs) were added to the cells (20 µg/ml) and incubated for 30 minutes at 37°C. The cells were then fixed with a 4% paraformaldehyde solution (Sigma), and immunostaining for ZEB1, E-cadherin, Ago-2 or Rab7 was performed using anti-ZEB1 (Santa Cruz Biotechnology), anti-E-cadherin (BD Biosciences), anti-Ago-2 (Abcam) and anti-Rab7 (Santa Cruz Biotechnology) antibodies. The dye 4′,6-diamidino-2-phenylindole dihydrochloride (DAPI) was added for nuclear counterstaining (Invitrogen). All multicolor fluorescence images were obtained using confocal laser-scanning microscopy (LSM5 Meta; Carl Zeiss).
+ Open protocol
+ Expand
6

Antigen Localization by Fluorescence Microscopy

Check if the same lab product or an alternative is used in the 5 most similar protocols
To detect the antigen specific localization of each conjugate, fluorescence microscopy was performed with a confocal laser microscope (LSM5 meta, Carl Zeiss, Jena, Germany). Ten thousand cells were seeded on cover-glass-bottomed dishes and incubated for 24 h. Each mAb-dye conjugate was then added to the culture medium at 10 µg/mL and incubated at 4 °C (on ice) for 1 h. After 1 h incubation on ice, the media with conjugates was changed to new media (containing no conjugates), then cells were observed after 6 h incubation at 37 °C.
Following 1 h incubation with each conjugate and confirmation of fluorescence signal, cells were washed with medium, and new medium was added and incubated for 3 days. Then, cells were observed with microscopy.
Analysis of the images was performed with ZEN software (Carl Zeiss).
+ Open protocol
+ Expand
7

Immunofluorescence Imaging of IR700 Conjugates

Check if the same lab product or an alternative is used in the 5 most similar protocols
To detect the antigen specific localization of IR700 conjugates, fluorescence microscopy was performed (IX61 or IX81; Olympus America, Melville, NY, USA). Ten thousand cells were seeded on cover-glass-bottomed dishes and incubated for 24 hr. Cet-IR700 or pan-IR700 was then added to the culture medium at 10 μg/mL and incubated at 37°C. The cells were then was hed with PBS; Propidium Iodide (PI) (1:2000) (Life Technologies) and Lyso Tracker Red DND-99 (lysotracker, final 75 nM; Life Technologies), were used to detect dead cells, and acidic organelles, respectively (Raben et al., 2009 ; Smith et al., 2012 (link)). PI was added into the media 30 min before PIT. The cells were then exposed to NIR light (2J/cm2) and serial images were obtained. The filter was set to detect IR700 fluorescence with a 590–650 nm excitation filter, and a 665–740 nm band pass emission filter.
Immunostaining was performed as previously described (Sato et al., 2011 (link)); briefly, the cells were fixed with 3.7% formaldehyde in PBS for 10 min at room temperature followed by permeabilization for 10 min with 0.2% Triton X-100 containing 2 mg/mL BSA. Alexa-fluor488 Phalloidin (Life Technologies) was used to detect actin. The fixed samples were observed with a confocal laser microscope (LSM5 meta, Carl Zeiss, Jena, Germany). Analysis of the images was performed with ImageJ software (http://rsb.info.nih.gov/ij/).
+ Open protocol
+ Expand
8

Fluorescence Microscopy for Antigen Localization

Check if the same lab product or an alternative is used in the 5 most similar protocols
To detect the antigen specific localization of each conjugate, fluorescence microscopy was performed with a confocal laser scanning microscope (LSM5 meta, Carl Zeiss, Jena, Germany). Ten thousand cells were seeded on coverglass-bottomed dishes and incubated for 24 h. Each mAb-dye conjugate or free dye was then added to the culture medium at 10 μg/mL or 0.5 μM, respectively, and incubated at 4 °C (on ice) for 1 h. The media containing conjugates or dyes was changed to new media (containing no conjugates/dyes) and cells observed after a 6 h incubation at 37 °C.
Alternatively, cells were incubated for 1 h with each conjugate or free dye and the presence of a fluorescence signal confirmed. Cells were then washed with medium, new medium (containing no conjugates/dyes) added, and incubated for 3 days, at which time cells were observed by microscopy. Image analysis was performed with ZEN software (Carl Zeiss).
+ Open protocol
+ Expand
9

Antigen-Specific Localization of Conjugates

Check if the same lab product or an alternative is used in the 5 most similar protocols
To detect the antigen specific localization of each conjugate, fluorescence microscopy was performed with a confocal laser scanning microscope (LSM5 meta, Carl Zeiss, Jena, Germany). Ten thousand cells were seeded on coverglass-bottomed dishes and incubated for 24 h. Each mAb-dye conjugate or free dye was then added to the culture medium at 10 μg/mL or 0.5 μM, respectively, and incubated at 4 °C (on ice) for 1 h. The media containing conjugates or dyes was changed to new media (containing no conjugates/dyes) and cells observed after a 6 h incubation at 37 °C.
Alternatively, cells were incubated for 1 h with each conjugate or free dye and the presence of a fluorescence signal confirmed. Cells were then washed with medium, new medium (containing no conjugates/dyes) added, and incubated for 3 days, at which time cells were observed by microscopy. Image analysis was performed with ZEN software (Carl Zeiss).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!