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Dsictrl

Manufactured by Horizon Discovery

The DsiCTRL is a laboratory instrument designed for the precise and controlled delivery of double-stranded interfering RNAs (dsRNAs) into mammalian cells. It enables the targeted knock-down of gene expression through the RNA interference (RNAi) pathway. The DsiCTRL facilitates the efficient transfection of dsRNAs, such as small interfering RNAs (siRNAs) and Dicer-substrate short interfering RNAs (DsiRNAs), into a variety of cell types to study gene function.

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2 protocols using dsictrl

1

Synthesis and Characterization of DsiRNA Agents

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DsiRNA were HPLC-purified, asymmetric, 25-mer dsRNA with 2-nucleotide UU overhangs on the 3’ end of the antisense strand: (1) DsiCTRL (GE Dharmacon) sense: 5’ – CGU UAA UCG CGU AUA AUA CGC GUA U – 3’, antisense: 5’ – AUA CGC GUA UUA UAC GCG AUU AAC G(UU) – 3’; MW: 16,523.02 g/mol; sequence based on scrambled siRNA (IDT). (2) DsiSTAT3 (GE Dharmacon) sense: 5’ – GGU CAA AUU UCC UGA GUU GAA UUA U – 3’, antisense: 5’ – AUA AUU CAA CUC AGG AAA UUU GAC C(UU) – 3’; MW: 16,493.0 g/mol; sequence based on siGENOME Mouse STAT3 (GE Dharmacon). (3) Chol-DsiCTRL (IDT) DsiCTRL with 3’-cholesterol conjugated to the sense strand; MW: 17,278.9 g/mol. (4) Chol-DsiSTAT3 (GE Dharmacon) DsiSTAT3 modified with 3’-cholesterol as described for Chol-DsiCTRL; MW: 17,197.92 g/mol.
For in vitro studies, lyophilized RNAi molecules were resuspended in sterile, nuclease-free ddH20 [100 μM] as directed (GE Dharmacon) and stored in aliquots (10 μL) at −80°C. For in vivo studies, lyophilized RNAi molecules were resuspended in the indicated buffer on the day of injection.
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2

RNAi Molecules for STAT3 Silencing

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HPLC-purified siRNA and DsiRNA RNAi with indicated (UU) overhangs were obtained from GE Dharmacon: (1) siCTRL sense: 5′-CGU UAA UCG CGU AUA AUA C(UU)-3′, antisense: 5′-GUA UUA UAC GCG AUU AAC G(UU)-3′; (2) DsiCTRL sense: 5′-CGU UAA UCG GCU AUA AUA CGC GUA U-3′, antisense: 5′-AUA CGC GUA UUA UAC GCG AUU AAC G(UU)-3′; (3) siSTAT3 sense: 5′-GGU CAA AUU UCC UGA GUU G(UU)-3′, antisense: 5′-CAA CUC AGG AAA UUU GAC C(UU)-3′; (4) DsiSTAT3 sense: 5′-GGU CAA AUU UCC UGA GUU GAA UUA U-3′, antisense: 5′-AUA AUU CAA CUC AGG AAA UUU GAC C(UU)-3′; (5)Chol-siCTRL: siCTRL with 3′-cholesterol conjugated to the sense strand; (6)Chol-siSTAT3: siSTAT3 with 3′-cholesterol conjugated to the sense strand; (7) Chol-DsiCTRL: DsiSTAT3 with 3′-cholesterol conjugated to the sense strand; (8) Chol-DsiSTAT3: DsiSTAT3 with 3′-cholesterol conjugated to the sense strand. For in vitro studies, lyophilized RNAi molecules were resuspended in sterile, nuclease-free ddH20 [100 μM] as directed (GE Dharmacon) and stored in aliquots [10 μL] at −80°C. For in vivo studies, lyophilized RNAi molecules were resuspended in the indicated buffer on the day of injection.
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