The largest database of trusted experimental protocols

Genome dna extraction kit

Manufactured by Tiangen Biotech
Sourced in China

The Genome DNA Extraction Kit is a laboratory tool designed to isolate and purify genomic DNA from a variety of biological samples, including tissues, cells, and microorganisms. It utilizes a standardized protocol and reagents to efficiently extract high-quality DNA for downstream molecular biology applications.

Automatically generated - may contain errors

5 protocols using genome dna extraction kit

1

Simultaneous Extraction and Quantification of Genomic and Mitochondrial DNA

Check if the same lab product or an alternative is used in the 5 most similar protocols
Both of the genome DNA and mtDNA were extracted simultaneously with a genome DNA extraction kit (Tiangen Biotech, Beijing, China) following the manufacture’s protocol (The genome DNA extraction kit is able to extract both genome DNA and mtDNA according to the information provided by the manufacture). Then the mtDNA copy number per cell is determined by Real-time PCR. The mixture of genome DNA and mtDNA served as the template, and the primer for genome DNA and mtDNA were listed in Table S1. mtDNA sequence served as the target while genome DNA sequence served as the reference.
+ Open protocol
+ Expand
2

MyoD1 Gene Amplification and Sequencing

Check if the same lab product or an alternative is used in the 5 most similar protocols
Blood was collected and stored at −20°C. Genomic DNA was isolated by using a Genome DNA Extraction Kit (TIANGEN, Beijing, China) according to the manufacturer's instruction. Primer pairs used for amplifying exon regions of MyoD1 were designed from reference sequences of the pigeon MyoD1 gene in GenBank (accession no: 102096590) by using Primer Premier 5.0 software (Premier Biosoft International, Palo Alto, CA). The primers were synthesized by TSINGKE Biotech Co., Ltd. (Hangzhou, China) and are listed in Table 1.
The PCR amplification was performed in reaction mixtures with a total reaction volume of 50 µL, containing 25 µL 2× Taq PCR MasterMix (including Mg2+, dNTP, and Taq DNA polymerase), 2 µL of each primer, 2 µL genomic DNA, and double-distilled water. The cycling protocol was 5 min at 94°C, 30 cycles of 94°C for 30 s, 40 s at the annealing temperature (Table 1), and extension at 72°C for 1 min, with a final extension at 72°C for 10 min. The PCR products were verified by 1.5% agarose gel electrophoresis and sequenced by Hangzhou Qingkezixi Biotech Co., Ltd (Hangzhou, China). To identify SNPs, sequences were analyzed with the DNAMAN software (DNAMAN Application 4.0.1.1, Lynnon BioSoft, San Ramon, CA, USA).
+ Open protocol
+ Expand
3

Genetic Analysis of Pigeon Reproduction Traits

Check if the same lab product or an alternative is used in the 5 most similar protocols
Sixty domestic pigeons (Columba livia) were used for the detection of SNPs in DRD2 gene and the analysis of the relationship between the SNPs and the reproduction traits. All birds (Taishen king pigeon) were obtained from Xingliang commercial pigeon farm (Wenzhou, China), hatched on the same day, male-female matched artificially based on pedigree data, and reared in a stair-step cage under the same nutritional and environmental conditions.
Four reproduction traits were measured according to The Poultry Production Performance Terms and Measurement Statistics Method (NY/T823-2004). These traits include egg production (total number of eggs; EP), total number of fertile eggs (FE), fertility rate (the ration of FE to EP; FR), and total hatching number (HN) within 500 days of age. Venous blood samples were collected from all sixty birds by veni-puncture and stored at −20°C. The genomic DNA was extracted using Genome DNA Extraction Kit (Tiangen, Beijing, China) according to the manufacturer's instructions. The quality of DNA was checked by both native DNA electrophoresis on 1.0% agarose gel and the ultraviolet spectrophotometer.
+ Open protocol
+ Expand
4

Genomic DNA and RNA Extraction Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Blood samples were collected from the jugular vein and stored at −20 °C (with EDTA) until genomic DNA extraction was performed. Genomic DNA was extracted using a Genome DNA Extraction Kit (TIANGEN, Beijing, China) under the guidance of the instruction manual.
Tissues were frozen immediately in liquid nitrogen after being separated and stored at −80 °C. Total RNA was extracted using TRIzol A+ Total RNA reagent (TIANGEN, Beijing, China). The amount and purity (OD260/OD280 ratio > 1.9) of the extracted RNA were measured by the NanoDropND2000 spectrophotometer (Thermo Fisher Scientific, Waltham, MA, USA), and the quality of the obtained RNA was checked by electrophoresis. The PrimeScript RT Reagent Kit with gDNA Eraser (Takara, Japan) was used to convert RNA to cDNA following the manufacturer’s protocol.
+ Open protocol
+ Expand
5

Cloning and Sequencing Antifungal Protein from Bacillus subtilis

Check if the same lab product or an alternative is used in the 5 most similar protocols
A pair of primers, designed as QF (5'-CGCGGATCCATGCCTTATCTGAAACGAGTG-3') and QR (5'-CCGCTCGAGTTTTTTTGTATAGCGCACC-3'), were designed according to the DNA sequence of the antifungal protein identified, and the underlined bases are BamHI and XhoI recognition sites, respectively. Genomic DNA of B. subtilis Em7 was prepared according to the manufacturer protocol of the Genome DNA Extraction Kit (TIANGEN, Beijing, China). The antifungal protein gene was amplified by polymerase chain reaction (PCR) using genomic DNA of Em7 as the template and QF/QR as the primers. The amplified product was purified using a PCR purification kit (Omega, Guangzhou, China) and ligated into the pMD20-T vector. The ligation mixture was transformed into E. coli JM109 competent cells by the heat-shock method. Positive clones were screened on LB plates containing ampicillin (100 μg/mL). The corresponding plasmids were extracted using a plasmid extraction kit (Omega) and sequenced by Beijing AuGCT DNA-SYN Biotechnology Co. (Beijing, China). Nucleotide sequence and corresponding amino acid sequences were analyzed using BLAST (NCBI database) and ExPASy Proteomics tools.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!