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Protran ba85 nitrocellulose membrane

Manufactured by Cytiva
Sourced in Germany, United States, United Kingdom

The Protran BA85 is a nitrocellulose membrane used in various laboratory applications. It is designed for the transfer and immobilization of proteins, nucleic acids, and other biomolecules. The membrane provides a stable and efficient platform for techniques such as Western blotting, dot blotting, and slot blotting.

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16 protocols using protran ba85 nitrocellulose membrane

1

Isolation and Characterization of Plasma-Derived Exosomes

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For each group (CTR, BPH, PCa) 4 mL of plasma was pooled and Size Exclusion Chromatography (SEC) was performed for the isolation of plasma-derived exosomes, as described previously [27 (link)]. Exosomes from plasma of CTR, BPH and PCa patients were lysed in CHAPS buffer 1 × containing Tris 10 mM pH 7.4, MgCl2 1 mM, ethyleneglycoltetraacetic acid (EGTA) 1 mM, CHAPS 0.5%, glycerol 10%, phenylmethylsulfonyl fluoride (PMSF) 1 mM and protease inhibitor cocktail (1 µg/mL leupeptin, 1 µg/mL pepstatin A, 1 µg/mL aprotinin, and PMSF 1 mM).
Protein concentration was determined using the Bradford protein assay (Bio-Rad Laboratories, Inc, Hercules, CA, USA). Thirty micrograms of exosomal lysates were resolved on 10% acrylamide gel and transferred to a Protran BA85 nitrocellulose membrane (Schleicher & Schuell, Keene, NH, USA). Nonspecific binding sites were blocked by incubation in PBS containing 0.05% Tween 20 and 5% milk powder. Blotting was performed employing anti-Tsg101 (4A10, GeneTex, Irvine, CA, USA), and anti-CD81 (B-11, Santa Cruz Biotechnology, Dallas, TX, USA) monoclonal antibodies, for 18 h at 4 °C. After incubation with appropriate anti-mouse peroxidase-conjugated secondary antibody (IgG; Amersham Biosciences, Milan, Italy) for 1 h at room temperature, membranes were revealed by enhanced chemiluminescent (ECL) substrate (Thermo Fisher Scientific, Waltham, MA, USA).
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2

Exosome Protein Characterization by Western Blot

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Briefly, subconfluent cells were lysed in CHAPS buffer 1× (Tris 10 mM pH 7.4, MgCl2 1 mM, ethyleneglycoltetraacetic acid (EGTA) 1 mM, CHAPS 0.5%, glycerol 10%, and phenylmethylsulfonyl fluoride (PMSF) 1 mM) with protease (1 µg/mL leupeptin, 1 µg/mL pepstatin A, 1 µg/mL aprotinin, and PMSF 1 mM) incubated for 30 min on ice and centrifuged for 30 min at 12,000 rpm at 4 °C, thus removing cell debris and collecting the supernatant. Exosomes were lysed in CHAPS buffer 1× and processed as previously described. Protein concentration was determined using the Bradford protein assay (Bio-Rad Laboratories, Inc, Hercules, CA, USA). Thirty micrograms per sample were resolved on 10% acrylamide gel and transferred to a Protran BA85 nitrocellulose membrane (Schleicher & Schuell, Keene, NH, USA). Membranes were blocked overnight with 5% dry milk in PBS 1×. Blotting was performed employing anti-Alix (3A9, ThermoFisher Scientific, Waltham, MA, USA), anti-Tsg101 (4A10, GeneTex, Irvine, CA, USA), and anti-CD81 (B-11, Santa Cruz Biotechnology, Dallas, TX, USA) monoclonal antibodies. After incubation with appropriate peroxidase-conjugated anti-immunoglobulin G (IgG; Amersham Biosciences, Milan, Italy), membranes were revealed by enhanced chemiluminescence (Pierce, Rockford, IL, USA).
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3

Western Blot Analysis of GFP Expression

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Western Blot analysis was performed as described in Bischof et al. (2017). Cells were broken by vortexing in the presence of glass beads (diameter 0.25–0.5 mm). Equal protein amounts were loaded on a 15% SDS‐PAGE gel. Proteins were blotted on a protran BA85 nitrocellulose membrane (Schleicher & Schuell, Germany) with 250 mA for 90 min at RT. The membrane was blocked with MTBS‐T (25 mm Tris pH 7.6, 137 mm NaCl, 0.1% Tween 20, 5% milk powder) for 90 min at RT and washed for 30 min with TBS‐T. The primary anti‐GFP‐antibody (SC‐9996; Santa Cruz Biotechnology, Santa Cruz, CA, USA) was diluted in MTBS‐T (1:1000) and incubated overnight at 4°C under constant shaking. The blot was washed three times with TBS‐T (3 × 10 min at RT) and incubated for 2 h at RT with a horse anti‐mouse IgG antibody [no. 7076; NEB/Cell Signaling (Ipswich, USA)]. The secondary antibody was diluted in MTBS‐T 1:3000. Detection was carried out with the Pierce (Thermo Fisher Scientific, Waltham, MA, USA) ECL western blotting substrate according to the manufacturer's instructions.
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4

GFP Western Blot Analysis Protocol

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Western Blot analysis was performed as described in Bischof et al. (2017) (link). Cells were broken by vortexing in the presence of glass beads (diameter 0.25–0.5 mm). Equal protein amounts were loaded on a 15% SDS-PAGE gel. Proteins were blotted on a protran BA85 nitrocellulose membrane (Schleicher & Schuell, Germany) with 250 mA for 90 min at RT. The membrane was blocked with MTBS-T (25 mM Tris pH 7.6, 137 mM NaCl, 0.1% Tween 20, 5% milk powder) for 90 min at RT and washed for 30 min with TBS-T. The primary anti-GFP-antibody (SC-9996; Santa Cruz Biotechnology, Santa Cruz, CA, USA) was diluted in MTBS-T (1:1000) and incubated overnight at 4°C under constant shaking. The blot was washed three times with TBS-T (3 × 10 min at RT) and incubated for 2 h at RT with a horse anti-mouse IgG antibody [no. 7076; NEB/Cell Signaling (Ipswich, USA)]. The secondary antibody was diluted in MTBS-T 1:3000. Detection was carried out with the Pierce (Thermo Fisher Scientific, Waltham, MA, USA) ECL western blotting substrate according to the manufacturer's instructions.
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5

Haptoglobin Western Blot Analysis

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Serum samples were diluted 1:250 in H2O and serum protein precipitated by the addition of 1/10 volume 100% (w/v) trichloroacetic acid (w/vol). Precipitated protein was centrifuged, protein pellets washed with ice-cold acetone and dried at 95 °C for 10 min. For SDS-PAGE, dried pellets were dissolved in 200 μl 2x Laemmli Sample Buffer containing 5% (v/v) 2-mercaptoethanol and boiled for 5 min at 95 °C. Proteins were separated on a 10% (w/v) SDS polyacrylamide gel and blotted onto Protran BA85 nitrocellulose membrane (Whatman) and blocked at room temperature for 1 h in PBS-0.1% (v/v) Tween −5% (w/v) non-fat dry milk (PBSTP). The membrane was incubated for 1 h at room temperature with 1/3500 rabbit-α-human haptoglobin (DakoCytomation), followed by incubation with 1/5000 goat-α-rabbit –HRPO (Santa Cruz). All incubation steps were performed in PBSTP and the membrane was subsequently washed three times in PBS −0.1% Tween. Detection occurred using ECL (GE Healthcare Life Sciences).
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6

Western Blot Analysis of Cyclooxygenase Enzymes

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Microsomes were prepared as reported previously (Kukk et al.
2012 (link)). A 10% SDS-polyacrylamide gel with a 4% stacking gel was used to separate the microsomal or purified protein sample. The proteins were transferred from the polyacrylamide gel onto the Protran BA85 nitrocellulose membrane (Whatman) using a Trans-Blot Semi-Dry apparatus (Bio-Rad) and the Bjerrum and Schafer-Nielsen transfer buffer (48 mM Tris, 39 mM glycine, 1.3 mM SDS and 20% methanol). Mouse PGHS-1 specific (Life Technologies) or mouse PGHS-2 specific monoclonal antibody (BD Biosciences) was used as the primary antibody. Alkaline phosphatase conjugated goat anti-mouse IgG (LabAs, Estonia) was used as the secondary antibody. The bands were visualized with nitro blue tetrazolium and 5-bromo-4-chloro-3-indolyl phosphate (Sigma-Aldrich).
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7

Proteomic Analysis of Bt Cells

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Cultures of Bt (100 mL) were grown in minimal media on yeast mannan (0.5% w/v) as a sole carbon source, to mid exponential growth phase (OD600nm 0.6-0.8). Cells were harvested by centrifugation and washed in 10 mL PBS before being resuspended in 5 mL of the buffer. The cells were split into four 1 mL aliquots. To 3 of the aliquots 2 mg ml-1 Proteinase K was added and incubated at 37° C for 1-16 h, the fourth sample was left as an untreated control also for 16 h. Following incubation with the protease the samples were centrifuged at 5000 x g for 10 min and the supernatant discarded. The cell pellets were resuspended in 1 ml PBS and the proteins precipitated by the addition of 200 µL trichloroacetic acid and incubation on ice for 30 min. The precipitated proteins were pelleted by centrifugation and washed 4 times in 1 mL ice cold acetone. The protein pellets were resuspended in 250 µL Laemmli buffer and subjected to SDS/PAGE. Gels were transferred to Whatman Protran BA 85 nitrocellulose membrane. Proteins of interest were detected using anti-sera raised against the corresponding protein. The secondary antibody used was a chicken-anti rat conjugated to horseradish peroxidase. Antibodies were detected by chemi-luminescence using Biorad Clarity Western ECL Substrate.
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8

SDS-PAGE and Western Blot Optimization

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The supernatant in NuPAGE buffer was incubated at 70°C for 5 min at 1100 rpm shaking. The tube was placed on a magnetic stand to remove the beads, and the supernatant was loaded on the SDS-PAGE gel. The SDS-PAGE was performed using 4-12% NuPAGE Bis-Tris gel (Life Technologies, NP0321BOX) following the manufacturer’s protocol with MOPS running buffer (Life Technologies, NP0001), NuPAGE Antioxidant (Life Technologies, NP0005) was added to the buffer in the upper chamber, and PAGE was performed for 45 min at 180 V. 5 μl of PAGE ruler plus (Thermo Scientific, SM1811) was used as protein size marker.
After the run, the dye front of the gel was removed and discarded since this part contained free radioactive ATP. The protein-RNA complexes from the gel were transferred to a Protran BA85 Nitrocellulose Membrane (Whatman) using the Novex wet transfer apparatus following the manufacturer’s protocol (Life Technologies; transfer for 1 h at 30 V using NuPAGE transfer buffer (Life Technologies, NP0006-1, supplemented with 10% methanol). The membrane was wrapped with saran wrap and exposed to a Carestream Kodak BioMax XAR Film (SIGMA, Z358487) at −80°C for 1 hour and overnight.
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9

SDS-PAGE and Western Blot Optimization

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The supernatant in NuPAGE buffer was incubated at 70°C for 5 min at 1100 rpm shaking. The tube was placed on a magnetic stand to remove the beads, and the supernatant was loaded on the SDS-PAGE gel. The SDS-PAGE was performed using 4-12% NuPAGE Bis-Tris gel (Life Technologies, NP0321BOX) following the manufacturer’s protocol with MOPS running buffer (Life Technologies, NP0001), NuPAGE Antioxidant (Life Technologies, NP0005) was added to the buffer in the upper chamber, and PAGE was performed for 45 min at 180 V. 5 μl of PAGE ruler plus (Thermo Scientific, SM1811) was used as protein size marker.
After the run, the dye front of the gel was removed and discarded since this part contained free radioactive ATP. The protein-RNA complexes from the gel were transferred to a Protran BA85 Nitrocellulose Membrane (Whatman) using the Novex wet transfer apparatus following the manufacturer’s protocol (Life Technologies; transfer for 1 h at 30 V using NuPAGE transfer buffer (Life Technologies, NP0006-1, supplemented with 10% methanol). The membrane was wrapped with saran wrap and exposed to a Carestream Kodak BioMax XAR Film (SIGMA, Z358487) at −80°C for 1 hour and overnight.
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10

Immunoblotting Analysis of POLQ Variants

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A portion of 293T cells from the MMEJ reporter assays performed after overexpression of POLQWT or POLQ-DY2230AA polymerase mutant was used for western blotting analysis. Cells were resuspended in IP lysis buffer (Cat. No: 87787, Thermo scientific, USA) and laemmli buffer was used to make whole-cell protein extracts. Equal amounts (20 μg) whole-cell protein lysates were separated on 4–20% bis tris gels (GenScript) by electrophoresis then transferred onto Protran BA85 nitrocellulose membrane (Whatman, Germany) and immunoblotted with antibodies against Actin (MA-5-11869,1:20000, Invitrogen) or POLQ (PA5-69577,1:500, Invitrogen) overnight followed by secondary antibodies IRDye 800CW (926-32210, 1:10000) or IRDye 680CW (926-68073, 1:10000). Blots were scanned using ODYSSEY software.
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