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6460 tandem mass spectrometer

Manufactured by Agilent Technologies
Sourced in United States, Germany, Canada

The Agilent 6460 tandem mass spectrometer is a high-performance analytical instrument designed for quantitative and qualitative analysis of complex samples. It features a triple quadrupole configuration that enables sensitive and selective detection of target analytes. The 6460 tandem mass spectrometer provides accurate mass measurements and reliable data for a wide range of applications.

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4 protocols using 6460 tandem mass spectrometer

1

Quantitative Amino Acid Analysis by LC-MS/MS

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Briefly, amino acids were analyzed as underivatized compounds by
liquid chromatography tandem mass spectrometry (LC-MS/MS) using an Agilent
6460 tandem mass spectrometer. Cells were trypsinized, washed in PBS and
incubated in 50μL 6% sulfosalysilic acid (1:1) to
deproteinize. Samples were spun for 5 minutes at 13,000rpm, and supernatants
were diluted with 2μM tridecafluoroheptanoic acid (TDFHA) containing
0.375μM glucosaminic acid and 0.25μM
S-2-aminoethylcysteine as internal standards.
Chromatographic separation was achieved using a porous graphitic carbon
(PGC) column (Thermo Fisher Scientific), in series with a fused-core column
(Advanced Materials Technology), using a gradient of increasing acetonitrile
concentration in TDFHA. Amino acids were analyzed in the positive ion mode
and detected by scheduled selective reaction monitoring (SRM). Data were
acquired using MassHunter Workstation Acquisition version B.02.01, and
exported to Excel (2007edition, Microsoft Corporation) for further
calculations. Quantitative values were obtained by relating chromatographic
peak areas to those derived from externally run calibration standards.
Further details in (Le et al.,
2014
).
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2

Quantification of ASNase PD Markers

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In this study, 1.4 mL polypropylene Matrix tubes and SepraSeal caps were purchased from Thermo Fisher Scientific and were used for frozen storage of dialyzed whole blood (DWB) matrix, DWB-derived quality control (QC) standards, and for the extraction of all study samples. Micrewtube® tubes (2.0 mL) and caps were purchased from Simport (Montreal, QC, Canada) and were used for frozen storage of the calibration (calibrator) standard spiking solutions. Slide-A-Lyzer Dialysis Cassette G2 (10,000 MWCO; 15 mL capacity) from Thermo Fisher Scientific was used to dialyze lysed whole blood matrix. A Kinetex HILIC (100 × 2.1 mm, 1.7 µm particle size) analytical column from Phenomenex (Torrance, CA, USA) was used for chromatographic separation of ASNase PD markers. Chromatographic data were acquired using a 1290 Infinity Binary UHPLC system coupled to a 6460 tandem-mass spectrometer produced by Agilent Technologies (Santa Clara, CA, USA). MassHunter LC/MS Data Acquisition Software (Version B.06.00) was used for control and operation of the LC-MS/MS system, and MassHunter Quantitative Analysis Software (Version B.06.00) was used for chromatographic peak integration. Weighted (1/x) linear regression analysis for each calibration curve was performed using GraphPad Prism (Version 6.05) from GraphPad Software (La Jolla, CA, USA).
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3

Quantification of Glucosinolates via UHPLC-MS/MS

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The identification and quantification of glucosinolates was conducted using ultra high-pressure liquid chromatography coupled to electrospray ionisation and a 6460 tandem mass spectrometer with triple quadrupole technology (UHPLC/MS/MS, Agilent Technologies, Waldron, Germany). The chromatographic separation was achieved by using a ZORBAX Eclipse Plus C18 (2.1 × 50 mm, 1.8 µm) (Agilent Technologies, Waldron, Germany) through a chromatographic gradient developed by applying different percentages of the solvents (A) 13 mM ammonium acetate pH 7 and (B) acetonitrile/formic acid (99.99:0.01, v/v), according to the multipurpose method optimised by Domínguez-Perles et al. [46 (link)], which separates intact glucosinolates, isothiocyanates, and their metabolites (Supplementary Table S1). The intact glucosinolates and isothiocyanates were identified following their MS2 fragmentation pattern [mass/charge (m/z) ratio] by applying positive or negative ionisation mode depending on the compound considered at the optima ESI conditions for the maximal detection of the analytes, and their retention time in comparison with authentic standards (Supplementary Table S2). The glucosinolate contents of the urine and plasma samples analysed were expressed as nanograms per mL (ng/mL).
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4

Quantification of Pharmaceuticals and Personal Care Products

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Duplicate water samples from each site were collected in 500 mL amber glass bottles to measure concentrations of select PPCPs. Surrogate standards were added to the samples and extractions performed using Oasis HLB cartridges (Waters Corporation, Milford, MA) as described in Metcalfe et al. [36 (link)] and Garcia-Lor et al. [37 (link)] for the acidic and neutral PPCPs, and antidepressants, respectively. The extracts were reduced in volume under a gentle stream of nitrogen, reconstituted in 90:10 water:methanol, and isotopically labeled internal standards added. Analysis was carried out by liquid chromatography tandem mass spectrometry as described in Lajeunesse et al. [38 (link)] using a Poroshell 120 PFP column (2.1 x 100 mm x 2.7 μm) on an Agilent 1260 HPLC connected to a 6460 tandem mass spectrometer equipped with a Jet Stream electrospray ionization source (Agilent Technologies, Santa Clara, CA). Quantification was carried out using isotope dilution. The performance of the extraction method was verified using spike and recovery tests, and the average recoveries were 48.2% for norfluoxetine, 67.6% for fluoxetine and 81.8% to 94.0% for the remaining analytes, with percent relative standard deviation ranging from 3.0% to 12.9% for all compounds.
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