liquid chromatography tandem mass spectrometry (LC-MS/MS) using an Agilent
6460 tandem mass spectrometer. Cells were trypsinized, washed in PBS and
incubated in 50μL 6% sulfosalysilic acid (1:1) to
deproteinize. Samples were spun for 5 minutes at 13,000rpm, and supernatants
were diluted with 2μM tridecafluoroheptanoic acid (TDFHA) containing
0.375μM glucosaminic acid and 0.25μM
S-2-aminoethylcysteine as internal standards.
Chromatographic separation was achieved using a porous graphitic carbon
(PGC) column (Thermo Fisher Scientific), in series with a fused-core column
(Advanced Materials Technology), using a gradient of increasing acetonitrile
concentration in TDFHA. Amino acids were analyzed in the positive ion mode
and detected by scheduled selective reaction monitoring (SRM). Data were
acquired using MassHunter Workstation Acquisition version B.02.01, and
exported to Excel (2007edition, Microsoft Corporation) for further
calculations. Quantitative values were obtained by relating chromatographic
peak areas to those derived from externally run calibration standards.
Further details in (
2014