The largest database of trusted experimental protocols

9 protocols using anti cd31 apc

1

Multiparameter Analysis of Cell Surface Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibody incubation was performed on ice for 15 min in PBS with 2% fetal bovine serum. The primary antibodies employed were anti-CD24-PeCy7 (eBiosciences, 25-0291-82, 1:1000), anti-CD24-BV711 (BD Biosciences, 563450, 1:1000), anti-CD29-PeCy7 (eBiosciences, 25-0242-82, 1:1000), anti-CD29-FITC (BD Biosciences, 561796, 1:1000), anti-CD45-APC (eBiosciences, 17-0451-82, 1:1000), anti-CD31-APC (eBiosciences, 17-0311-82, 1:1000), anti-TER119-APC (eBiosciences, 17-5921-82, 1:1000) and anti-Dyeflour450 (eBiosciences, 65-0863-14, 1:1000). Flow cytometry analysis was performed using Aria SROP (BD). The data were analyzed using FlowJo software. For sorting cells, an Aria III (BD) instrument was used.
+ Open protocol
+ Expand
2

Isolation and Analysis of Mouse Liver Non-Parenchymal Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Isolation of mouse liver non-parenchymal cells was as described in this section. Subsequently, antibodies including anti-F4/80-APC (17-4801-82), anti-CD11c-APC (17-0114-82), anti-CD3e-APC (17-0031-82), and anti-CD31-APC (17-0311-82, eBioscience, San Diego, CA) were added to the cell suspension, respectively. After 30 min of incubation at 4°C in the dark, the cells were washed with PBS and incubated with fixation/permeabilization buffer (eBioscience, San Diego, CA). Then, the cells were washed and stained with anti-NLRP3/NALP3-750 (IC7578S, R&D Systems, Eugene, Oregon) for 60 min at 4°C and analyzed with a flow cytometer. FACS was performed on a FACSAria and analyzed with FACSDiva 4.1 (BD Biosciences).
+ Open protocol
+ Expand
3

Multiparametric Flow Cytometry Immunophenotyping

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were stained with anti-CD31-PE, anti-CD33-FITC, anti-CD34-PE, anti-CD45-FTIC, anti-CD13-PE, anti-CD44-PE, anti-CD45-FITC, anti-CD71-PE, anti-CD90-PE, anti-CD95-APC, anti-HLA-ABC-FITC, anti-HLA-DR-FITC (all from BD Bioscience), anti-CD31-APC (eBioscience), anti-CD13-PE (Biolegend) and anti-CD105-FITC (R&D Systems). The stained cells were analyzed with a FACSCalibur flow cytometer (Becton Dickinson).
+ Open protocol
+ Expand
4

Flow Cytometry of Murine Lung Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Lungs were prepared and cells were flow sorted as previously described (Lee et al., 2014 (link)). Briefly, mice were anesthetized with avertin overdose. Lungs were perfused with cold PBS followed by intratracheal instillation of 2 mL dispase (Corning). Lungs were placed on ice, minced, and incubated in 0.0025% DNase (Sigma-Aldrich) and 100 mg/mL collagenase/dispase (Roche) in PBS for 45 min at 37°C. Cells were then sequentially filtered through 100- and 40-μm cell strainers (Falcon) and centrifuged at 1000 rpm for 5 min at 4°C. Cells were resuspended in red blood cell lysis buffer (0.15 M NH4Cl, 10mM KHCO3,0.1 mM EDTA) for 90 s at room temperature, followed by addition of DMEM (Gibco) and FBS. Cells were centrifuged at 1000 rpm for 5 min at 4°C and then resuspended in PBS/10% FBS for further staining. The following antibodies were used: anti-CD31 APC, anti-CD45 APC, anti-Ly-6A/E (SCA1) APC/Cy7 (all Thermo Fisher Scientific), anti-CD326 (EpCAM) PE/Cy7 (Biolegend) (all 1:100). DAPI (Sigma-Aldrich) was used to eliminate dead cells. Single stain controls and fluorescence minus one (FMO) controls were included for each experiment. FACS was performed on a FACSAria II and analysis was done on FlowJo (BD).
+ Open protocol
+ Expand
5

Fibroblast Negative Selection Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fc regions on cells were blocked with 2 µl Fc-block (BD Pharmingen, 553141) in 50 µl FACS buffer per 106 cells for 10 min on ice. For fibroblast negative selection, the cells were incubated in staining cocktail containing anti-CD31-APC (1 µl/106 cells, BD Biosciences, 561814, Clone: MEC 13.3), anti-CD45-APC (1 µl/106 cells, BD Biosciences, 559864, Clone: 30-F11), anti-CSPG4-AF647 (0.4 µl/106 cells, Bioss, bs-4800R-A647), and anti-CD326-APC (5 µl/106 cells, BD Biosciences, 563478, Clone G8.8) in FACS buffer for 30 min on ice. 4′-6′-diamidino-2-phenylindole (DAPI) was added to the cell suspension before sorting. We gated on DAPI, Epcam, CD31, CD45, NG2 cells after excluding doublets. The cells were sorted using a FACSARIA II (BD Biosciences) into individual wells of 386-well plates containing lysis buffer provided by the Eukaryotic single cell facility (ESCG), SciLifeLabs, (Stockholm, Sweden). For population resorting, cells obtained from MMTV-PyMT mice crossed with the PdgfRα-EGFP reporter mouse42 (link) were stained with anti-CD31-APC, anti-CD45-APC, anti-NG2-AF647, anti-CD326-APC, anti-PDGF-Rβ-biotin (Thermo Scientific, 13-1402-82) for 30 min on ice, followed by 20 min incubation on ice with streptavidin-PE/Cy7 (Thermo Scientific, 25-4317-82).
+ Open protocol
+ Expand
6

Flow Cytometry of Murine Lung Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Lungs were prepared and cells were flow sorted as previously described (Lee et al., 2014 (link)). Briefly, mice were anesthetized with avertin overdose. Lungs were perfused with cold PBS followed by intratracheal instillation of 2 mL dispase (Corning). Lungs were placed on ice, minced, and incubated in 0.0025% DNase (Sigma-Aldrich) and 100 mg/mL collagenase/dispase (Roche) in PBS for 45 min at 37°C. Cells were then sequentially filtered through 100- and 40-μm cell strainers (Falcon) and centrifuged at 1000 rpm for 5 min at 4°C. Cells were resuspended in red blood cell lysis buffer (0.15 M NH4Cl, 10mM KHCO3,0.1 mM EDTA) for 90 s at room temperature, followed by addition of DMEM (Gibco) and FBS. Cells were centrifuged at 1000 rpm for 5 min at 4°C and then resuspended in PBS/10% FBS for further staining. The following antibodies were used: anti-CD31 APC, anti-CD45 APC, anti-Ly-6A/E (SCA1) APC/Cy7 (all Thermo Fisher Scientific), anti-CD326 (EpCAM) PE/Cy7 (Biolegend) (all 1:100). DAPI (Sigma-Aldrich) was used to eliminate dead cells. Single stain controls and fluorescence minus one (FMO) controls were included for each experiment. FACS was performed on a FACSAria II and analysis was done on FlowJo (BD).
+ Open protocol
+ Expand
7

Mesenchymal Stem Cell Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Both Aged and Young MSCs were characterized by their cell surface antigen expression and trilineage differentiation capability using flow cytometry. Antibodies used for MSC characterization were anti-CD105-APC (17-1057-41; Thermo Fisher Scientific), anti-CD44-APC (17-0441-81; Thermo Fisher Scientific), anti-CD73-APC (17-0739-41; Thermo Fisher Scientific), anti-CD90-APC (17-0909-41; Thermo Fisher Scientific), anti-CD45-APC (17-9459-41; Thermo Fisher Scientific), and anti-CD31-APC (17-0319-41; Thermo Fisher Scientific).
+ Open protocol
+ Expand
8

Muscle-Derived Immune Cell Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Using 0.2% II type collagenase (Sigma, USA), inflamed TA muscles were collected and digested for 40 min at the condition of 37 °C. In vivo, the single cell suspension obtained from muscle homogenate was blocked. In vitro, cultured cells were digested with Trypsin (Sigma, USA), resuspended in ice cold PBS to obtain the single cell suspension. The following fluorescent antibodies were used: anti-CD45-Pacific Blue, anti-F4/80-PE, anti-CD11b-PE, anti-MHC-II-eFluor 450, anti-Ly6C-FITC, anti-CX3CR1-APC, anti-CD206-eFluor 700, anti-Bcl3-FITC, anti-CD31-APC, anti-IL-10-FITC, rabbit anti-p-STAT3-FITC, the antibodies above were purchased from ThermoFisher and their dilution ratios were 1:100; Other antibodies involved anti-Vav1-FITC (1:100, Biorbyt, USA), anti-Rac1-GTP-FITC (1:100, Proteintech, USA), anti-Tunel-FITC (5:50, Yeason, China), anti-Annexin-V-APC (5:100, Sigma, USA), anti-CRT-Alexa Fluor 647 (1:100, Abcam, UK), anti-PKH67-Alexa Fluor 647 (1:250, Zeye, China), anti-CD36-Alexa Fluor 700 (1:100, eBioscience, USA), and anti-PPARγ-FITC (1:100, Abcam, UK). To analyze the labeled cells, FACSAria II cell sorter with FlowJo software (BD Biosciences, USA) were used.
+ Open protocol
+ Expand
9

Isolation of Lung Cell Subpopulations

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mice were anesthetized with avertin, perfused with 10 ml PBS, followed by intratracheal instillation of 2 ml dispase (Corning). Lungs were iced, minced and incubated in 0.0025% DNAse (Sigma Aldrich) and 100 mg/ml collagenase/dispase (Roche) in PBS for 45 min at 37°C, filtered through 100 μm and 40 μm cell strainers (Fisher Scientific), and centrifuged at 1000 rpm, 5 min at 4°C. Cells were resuspended in red blood cell lysis buffer (0.15 M NH4Cl, 10mM KHCO3, 0.1 mM EDTA) for 1.5 min, washed with advanced DMEM (Gibco), and resuspended in PBS/10% FBS (PF10) at 1 million/100 μl. Depending on the experiment, cells were incubated for 10 min on ice with DAPI as a viability dye and the following antibodies: anti-CD31 APC, anti-CD45 APC, anti-Ly-6A/E (SCA1) APC/Cy7 (all Thermo Fisher Scientific), anti-CD326 (EP-CAM) PE/Cy7 (Biolegend) (all 1:100). Single stain controls and fluorophore minus one (FMO) controls were included for each experiment. FACS was performed on a FACSAria II and analysis was done with FlowJo.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!