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10 protocols using ab115819

1

Quantitative Protein Analysis in Cell Signaling

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Wnt and other signal alterations in protein levels were measured using Western blot analysis. Cell samples were lysed in ice-cold (4 °C) NP-40 or RIPA lysis buffer with a combination of a protease inhibitor, phosphatase inhibitor, and phenylmethylsulfonyl fluoride. The total protein content of the samples was equalized, and protein concentrations of the lysates were determined using the bicinchoninic acid (BCA) method (with reagents from Pierce Biotechnology). SDS-PAGE was used to separate the total proteins, and the membranes (0.2 m nitrocellulose or PVDF) were then transferred (both from Bio-Rad, Hercules, CA, USA). iNOS (1:2000; AB115819, Abcam, Cambridge, UK), anti-actin (1:1000; 4970, CST, Danvers, MA, USA), anti-Wnt3a (1:1000; 09-162, Millipore, Burlington, MA, USA), anti-β-catenin (1:1000; 610153, BD Biosciences, San Diego, CA, USA), and anti-GAPDH (1:5000; G9545, Sigma-Aldrich, St. Louis, MO, USA) were used. The membranes were then produced using PerkinElmer’s enhanced chemiluminescence reagents and secondary antibodies linked to horseradish peroxidase (R&D Systems). Quantity One 4.6.5 and the Molecular Imager (ChemiDoc XRS; Bio-Rad) were used to examine the data (Bio-Rad).
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2

Histological Analysis of Maxillae

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The maxillae were used for histology staining as we previously described [32 (link)]. Hematoxylin and eosin (H&E) staining, Masson staining and Trap staining were performed. For the immunohistochemical staining of macrophages, the samples were incubated with anti-iNOS (ab115819, Abcam) primary antibodies overnight. Afterwards, the secondary antibody (CST, USA) was incubated. To quantify the positive cells, three separate areas near the periodontium of the second molar for each sample were randomly selected.
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3

Immunohistochemical Analysis of iNOS and COX2

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The extracted OA tissues from rats and normal cartilage tissues from sham-operated rats were routinely embedded, dewaxed, hydrated, and then rested for 15 min at room temperature with a drop of 3% H2O2 and for 15 min at room temperature with a drop of normal goat serum sealant. After washing, the tissues were incubated overnight at 4°C with 50 μL primary antibody to iNOS (1:500, ab115819, Abcam) and COX2 (1:500, ab179800, Abcam) and with secondary antibody (1:500, ab205718, Abcam) for 15 min at 37°C. Horseradish-labeled streptavidin working solution was added dropwise and incubated for 15 min at 37°C for diaminobenzidine color development. After being rinsed with distilled water, the tissues were then counter-stained with hematoxylin for 30 s, dehydrated, and sealed. Cells showing brownish-yellow or brownish-brown granules in the nucleus were considered positive.
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4

Streptozotocin-Induced Diabetes Protocol

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Streptozotocin (STZ) (S0130) was procured from Sigma-Aldrich Chemical Company (St. Louis, MO, USA) and Atripla, a fixed-dose combination antiretroviral drug (cART) was purchased from Bristol-Myers Squibb and Gilead Sciences (Foster City, CA, USA). The primary antibodies interleukin-1beta (IL-1β) (ab2105), interleukin-6 (IL-6) (ab9324), tumor necrosis factor-alpha (TNF-α) (ab6671), inducible nitric oxide synthase (iNOS) (ab115819), malondialdehyde (MDA) (ab243066), 8-hydroxydeoxyguanosine (8-OHDG) (ab62623), caspase 3 (ab4051), and Ki-67 (ab15580) were purchased from Abcam (Cambridge, MA, USA). The biotinylated goat anti-rabbit (BA-1000) and goat anti-mouse (BA-9200) secondary antibodies, and Avidin–Biotin Complex kit (ABC) (PK-6100) were purchased from Vector Laboratories (Burlingame, CA, USA).
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5

Multiplex Immunohistochemistry of Kidney Tissue

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After deparaffinization and rehydration, renal tissue sections underwent antigen retrieval, blocking and antibody incubation. The primary antibodies included anti-KIM-1 (1:100, #NBP2-43761, Novus, USA), CD206 (1:200, #87887, Cell Signaling Technology), and iNOS (1:100, ab115819, Abcam). After incubation with the three antibodies, the nuclei were stained with DAPI for 5 min at 25 °C. Each section was observed using an Opal 4-color IHC kit (#NEL821001KT, Akoya Biosciences, MA, USA) containing Opal 520, Opal 570, Opal 690, and spectral DAPI. The multiplex TSA immunostaining tissue sections were observed under a confocal microscope (#LSM900, ZEISS microscopy, Germany) equipped with a digital camera.
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6

Quantitative Immunohistochemistry Analysis

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Immunohistochemistry was conducted following the method in a previous report [23 (link)]. Antibodies including LC3B (1:600, #ab192890, Abcam, UK), p62 (1:100, #ab207305, Abcam, UK), Beclin1 (1:700, #ab207612, Abcam, UK), CD86 (1:400, #ab220188, Abcam, UK), iNOS (1:100, #ab115819, Abcam, UK), and CD163 (1:1000, #16646-1-AP, Pro-teintech, China) were used to detect protein expression in tissues. Images were captured at 100x and 400x magnification with the same parameters, and five fields of view per sample were randomly selected to assess the expression levels of the protein. Next, the percentage and the staining intensity of positive cells in each image were analyzed automatically by the “IHC profiler” plugin in Image J software (Version: 1.52a). H-score (H-score = (1 × (% of cells 1+) + 2 × (% of cells 2+) + 3 × (% of cells 3+)), 1 = lack or weak expression, 2 = moderate expression, 3 = strong expression) was applied to quantify the IHC images [24 (link),25 (link),26 (link)]. The average H-score from five fields of view was defined as the final score of the sample. Samples with poor immunohistochemical staining were removed.
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7

Immunohistochemical Analysis of Colon Tissue

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Mouse colon tissues were embedded in paraffin and sliced with an ultra-thin microtome. Slices were then deparaffinized with xylene, rehydrated with gradient alcohol, and incubated with 3% H2O2 to block activity of endogenous peroxidase. Subsequently, the slices were boiled in 10 mM sodium citrate (pH 6.0) for 30 min, then blocked with 10% normal goat serum for 15 min, and incubated with the corresponding Abcam (Cambridge, UK)-purchased primary rabbit antibodies to NLRP3 (ab214185, 1: 100), arginase 1 (Arg1, ab233548, 1: 2000), iNOS (ab115819, 1: 100) overnight in a damp room at 4 °C. The following day, slices were incubated with the corresponding secondary antibodies goat anti-rabbit horseradish peroxidase (HRP)-labeled immunoglobulin G (IgG) (ab205718, 1: 2000) for 1 h at room temperature, and a 2,4-diaminobutyric acid (DAB) kit (Invitrogen, Carlsbad, CA, USA) was used for immunoreactivity detection.
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8

Histopathologic Evaluation of Gastric Inflammation

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Mouse gastric tissues were prepared for hematoxylin-eosin (H&E) and immunohistochemistry (IHC) staining as described previously [20 (link)]. H&E staining was conducted to evaluate the mucosal and inflammatory cell infiltration of the gastric cells. The histopathologic grades were classified based on the severity of inflammatory cell infiltration: level 0 (no inflammatory cells), level 1 (minimal), 2 (mild), 3 (moderate), 4 (marked), and 5 (severe), as described previously [25 (link)].IHC staining was performed by using antibodies against COX-2 (PA5-88606, Thermo Fisher Scientific, Waltham, MA, USA) and iNOS (ab115819, Abcam, Boston, MA, USA), respectively. The tissue sections were then incubated with ImmPRESSHRP Universal Antibody (MP-7500, Vector Laboratories, Newark, CA, USA), and finally developed with an ABC kit (ImmPACT DAB SK-4105, Vector Laboratories). The stained tissues were then analyzed using a microscope (AXIO IMAGER M2, Carl Zeiss, Oberkochen, Germany). The image was analyzed the intensity of protein expression using ImageJ (National Institute of Health, Bethesda, MD, USA), as previously described [26 (link)]. Five fields were randomly selected per sample to calculate the mean intensity and compared to the control group (100%).
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9

Immunohistochemical Analysis of Carotid Sections

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The carotid sections were immersed in antigen retrieval solution and dried in an oven at 60°C for 30min. The sections were then put into 3% H2O2 for 10min to block the endogenous peroxidase activity and incubated with normal goat serum for 15min at room temperature. Subsequently, primary antibodies were added in the sections separately at 4°C overnight in a humid chamber (anti-α-smooth muscle actin (α-SMA), ab5694, Abcam, United States; anti-Macrophage/Monocyte (MOMA-2), GTX39773, GeneTex, United States; anti-iNOS, ab115819, Abcam, United States; anti-arginine 1 (Arg-1), ab23354, Abcam, United States). After that, the sections were incubated with Biotinylated Goat anti-Mouse or Goat anti-Rabbit IgG (1:200) for 2h. After development with 3,30-diaminobenzidine (DAB) and counterstaining with hematoxylin, a light microscope was used to photograph the sections. Average optical density of staining area was semi-quantitatively calculated by Image-Pro Plus 6.0 software.
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10

Histological and Immunohistochemical Analysis of Murine Renal Tissue

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After fixing with formalin and embedding in paraffin, murine renal tissues were cut into 2 μm sections. The murine renal tissue sections were analyzed using hematoxylin and eosin (H&E) staining and periodic acid-Schiff (PAS) staining. Six randomly selected fields of view were chosen to score necrosis according to the following criteria: “0” indicated normal renal tubules, “1” indicated <10% necrotic renal tubules, “2” indicated 11–25% necrotic renal tubules, “3” indicated 26–75% necrotic renal tubules, and “4” indicated >75% necrotic renal tubules [21 (link),22 ]. The primary antibodies used for immunohistochemical staining were the CD68 (1:200, ab955, Abcam, Cambridge, UK), CD206 (1:200, 87887, Cell Signaling Technology, Danvers, MA, USA), iNOS (1:100, ab115819, Abcam), and CD163 (1:500, ab182422, Abcam) antibodies.
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