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58 protocols using phorbol myristate acetate (pma)

1

Isolation and Activation of Bone Marrow-Derived Neutrophils

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BMDNs were purified as previously described (Swamydas et al. 2015 ). In brief, bone marrow cells were resuspended in 1mL of ice-cold PBS and layered on top of a pre-layered solution of Histopaque 1119 (3mL, 11191, Sigma) on the bottom and Histopaque 1077 (3mL, 10771, Sigma) on top. Cells were centrifuged at 500xg for 30min at room temperature without deceleration. BMDNs were collected at the interface of the Histopaque layers, and purity was assessed by flow cytometry. For PMA activation, BMDNs were treated with PMA (100nM, Abcam) for 15min, washed, and cultured for conditioned media collection.
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2

Heterocellular Spheroid Formation for Osteoclastogenesis

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Human peripheral blood-derived monocytes THP-1 (ATCCR TIB-202™, VA, USA) was added to pre-warmed ATCC-formulated RPMI-1640 medium, supplemented with 10% FBS and 0.05 mM 2-mercaptoethanol to reach the desired cell density. After reaching a cell density of ~1 × 106 cells per mL, the suspension media was collected and centrifuged. The cell pellet was resuspended into an osteoclast differentiation media constituting of RPMI 1640 supplemented with 40 ngml−1 phorbol 12-myristate 13-acetate (PMA, Abcam, Cambridge, UK), 10 ngml−1 receptor activator of nuclear factor-kappa β ligand (RANKL, Abcam), 10 % FBS, antibiotic/antimycotic, and non-essential amino acids (Gibco, USA) (16 (link)–18 ), mixed with hMSC cells in different ratios of 2:1 and 3:2 hMSCs:THP1 (referred as 2:1 hMSCs:THP1 and 3:2 hMSCs:THP1) and pipetted into each well of a U-bottom 96-well plate to facilitate formation of heterocellular spheroids (~400 μm in diameter) with ~15,000 cells per well. Cultures were maintained in a mixed media of osteoblast and osteoclast differentiation media at the same ratio as of the cells in heterocellular spheroids at 37 °C under humidified atmosphere of 5% CO2. Cell medium was changed every 2–3 days during the entire course of the experiment.
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3

Modulation of NMDA and M-Channels by PKC and PI3K

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NMDA (CAT No: HB0454) and XE-991 (M channel/Kv7 blocker, CAT No: HB1090) were purchased from Hellobio (Princeton, NJ, USA) and were dissolved in water to make a stock solution. They were delivered into the recording chamber at their final concentrations through a syringe pump. PKC activator, PMA (CAT No: ab120297) and PKC inhibitor, GF 109203X (Bisindolylmaleimide 1 (Bis-1), CAT No: ab120844) were purchased from Abcam (Cambridge, UK) and were dissolved in DMSO to make a stock solution. They were added to the incubation solution at a concentration of 1.0 μM for PMA and 2.5 μM for Bis-1. The following agents were dissolved in DMSO to make a stock solution and were added to the internal solution. CaM antagonist, W-7 (CAT No: ab143768) was obtained from Abcam, and PIP2 (CAT No: P-4508-2) was purchased from Echelon Bioscience (Salt Lake City, UT, USA). LY294002 (CAT No: HY-10108, PI3K inhibitor) and AS605240 (CAT No: HY-10109, a specific inhibitor of the PI3Kγ) were purchased from MCE (Monmouth Junction, NJ, USA). Go6976 (CAT No: ab141413, a specific inhibitor of PKCα and PKCβ) and LY333531 (CAT No: ab219866, selective PKCβ inhibitor) were purchased from Abcam.
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4

Macrophage-Conditioned Medium Assay

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The medium collected from control and activated macrophages was defined as the conditioned medium (CM). After U937 cells were cultured in the presence of PMA (Abcam, Cambridge, UK) at a final concentration of 50 ng/ml for 24 h, most of the suspended cells differentiated into macrophages and attached to the plate bottom. Next, the adherent cells were washed twice with PBS and cultured with a serum-free medium. Macrophages were maintained in a serum-free medium throughout the experimental period as control or incubated with HBeAg for 24 h to activate macrophages. CM collected from control (CM-C) and activated macrophages (CM-E) was filtered with a 0.45-mm membrane filter before being added to LX-2 cells.
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5

Quantifying IFN-γ-Producing T Cells

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Cells from ELISpot plate were collected in media supplemented with GolgiStop Protein Transport Inhibitor (BD Biosciences, NJ, USA) and incubated for 6 hr at 37°C. Positive control group was treated with 50 μM PMA (Abcam, UK), 1 mg/mL Ionomycin (Abcam, UK). Cells were then washed, blocked with Fc receptor (Biolegend, CA, USA), and stained with CD3-PE (clone HIT3a, Biolegend), CD4-PE/Cyanine7 (clone RPA-T4, Biolegend), CD8-FITC (clone RPA-T8, Cell Signaling) antibodies for 2 hr at 4°C. Cells were permeabilized for 20 mins at 4°C and then stained overnight with IFN-γ-APC (clone 4S.B3, Biolegend) antibody at 4°C.
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6

Quantifying Latent HIV in CD4+ T Cells

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Primary CD4+ T lymphocytes from PBMCs of HIV-infected patients were purified by negative selection in accordance with the instructions provided by the manufacturer (MagniSort Human CD4+ T Cell Enrichment; Affymetrix). Isolated CD4+ T cells (purity routinely >95%) were cultured in complete RPMI medium supplemented with 10% FBS, 100 µg/ml streptomycin, and 100 U/ml penicillin alone or stimulated with PMA (50 ng/ml; Abcam, Inc.) and Iono (0.5 µg/ml, Abcam, Inc.) for 13 h in the presence of raltegravir (1 µM) and nevirapine (100 nM) or with romidepsin (40 nM) for 24 h. Cells were then extensively washed and subjected to the RNA FISH-flow assay for detection of viral RNA and the viral Gag p24 protein. A minimum of 2 million CD4+ T cells were used per condition.
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7

Cytokine Production by T Cell Subsets

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Isolated purified EM CD8+ T cells or purified CD103+ and CD103-CD8+ T cells were plated (50,000–200,000 cells/well) in round bottom ultra-low attachment 96-well plates (Corning, Corning, NY) in X-VIVO 15 without Phenol Red media supplemented with 10% charcoal dextran-stripped human AB serum. Purified CD8+ T cells were treated with or without E2 (5 × 10− 8 M) or P (1 × 10− 7 M) for 48 h. Purified CD103+ and CD103-CD8+ T cells were activated with phorbol 12- myristate 13-acetate (PMA) (100 ng/ml, Abcam) and ionomycin (2 μM, Calbiochem) for 24 h. The culture supernatants were collected and stored at − 80 °C until analysis. TNFα, IL-6 and IFNγ were measured using Millipore human cytokine multiplex kits (EMD Millipore. Corporation, Billerica, MA) according to the instructions. Signal was measured using the Bio-Plex array reader (Bio-Rad). Bio-Plex Manager software with five-parametric-curve fitting was used for data analysis. Data were calculated according to the cell number to compare baseline production or normalized as the fold change in baseline production to determine responding to hormone treatment or PMA stimulation.
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8

Neutrophil Stimulation and Imaging

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Neutrophils were stimulated with 100 nM PMA (Phorbol 12-myristate 13-acetate, Abcam, Cambridge, UK) or 4 µM Calcium ionophore A23187 (CI, Sigma-Aldrich, Munich, Germany). Sytox Green was added to reach a final concentration of 1 µM (Thermo Fisher Scientific, Karlsruhe, Germany). Stimulation solutions were prepared in 1.25-fold of final concentration to allow measurement of blank (80 µL) and thereafter addition of concentrated cell suspension (20 µL).
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9

PMA Stimulation and ROS Detection

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Cells were stimulated with 10 nM PMA (Abcam, Cambridge, UK) or left untreated. After an incubation time of 15 min, 15 µM DHR 123 (Sigma-Aldrich, Steinheim, Germany) was added for another 15 min. Next, the immunofluorescence signal was analyzed using FACSCalibur.
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10

THP-1 Monocyte-to-M2 Macrophage Differentiation

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The THP-1 cells (Shanghai Institute of Nutrition and Health, Shanghai, China) were cultured in Dulbecco’s modified Eagle medium (DMEM, Gibco, Grand Island, NY, USA) with 10% fetal bovine serum (FBS, Gibco) and incubated at 37 °C under 5% CO2. The THP-1 monocytes went through a 72 h treatment of 100 ng/mL PMA (Abcam, Cambridge, MA, USA), resulting in their conversion into M0 macrophages. Subsequently, these macrophages were subjected to a 48 h incubation with 20 ng/mL IL-4 (Peprotech, Rocky Hill, NJ, USA), leading to the acquisition of M2 macrophages.
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