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46 protocols using sucrose

1

Synthesis and Characterization of Rare-Earth Doped Nanoparticles

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All the chemicals were of analytical
grade and were used without further purification; yttrium nitrate
hexahydrate (Y(NO3)3·6H2O, 99.89%),
gadolinium nitrate hexahydrate (Gd(NO3)3·6H2O, 99.89%), and terbium nitrate hexahydrate (Tb(NO3)3·6H2O, 99.89%), PEI (with Mw = 25 000 and Mn =
10 000), TNP, 2,4-DNT, 2,6-DNT, 2,4-DNP, RDX, phenylalanine,
cysteine, isoleucine, tryptophan, glutamic acid, aspartic acid, lysine,
histidine, and glutamine were purchased from Sigma-Aldrich Inc. TNT
and RDX were purchased from HEMRL, Pune. NaCl, Na2HPO4, NaH2PO4, Na2CO3, NaHCO3, and NaOH were received from Thomas Baker. NH4F was received from Merck. Dextrose, glucose, sucrose, fructose,
lactose, and maltose were received from Himedia laboratories Pvt.
Ltd. 1,3-DNB, 4-NP, 2,4-DNB, NM, 4-NT, NB, copper oxychloride, cypermethrin,
malathion, fenvelerate, carbendazim, and chloropyrifos were purchased
from a local company and used as received. Ethanol was obtained from
Hayman Ltd. Deionized water was used throughout the experiments.
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2

Sucrose Extraction Protocol

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Sucrose was procured from HiMedia, India. Ethanol was purchased from MP Biomedicals, India; isopropanol, acetone was from SRL chemicals; mEthanol was procured from SDFCL, Mumbai. All other chemicals unless specified were obtained from Merck enterprises, India.
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3

Leaf Explant Callus Induction Protocol

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Surface sterilized leaf explants were then blotted dry and prepared by trimming with the help of a scalpel and inoculated in the callus inducing medium [18 ,19 (link)]. Murashige and Skoog (MS) [19 (link)] medium supplemented with 3% (w/v) sucrose (Hi Media, India), 0.8% (w/v) agar (Hi Media, India), 1.5 mg L−1 2,4-dichlorophenoxy acetic acid (2,4-D) and 1.5 mg L−1 Kinetin (Kn) was used as a culture medium. The pH of the medium was adjusted to 5.8 ± 0.2 prior to autoclaving. All cultures were maintained at 25 ± 2 °C temperature with a 16/8 hr photoperiod at 1000 lux light, and the humidity of the culture room was maintained at 60–70%.
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4

Micropropagation of Plants via Shoot Induction

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Murashige and Skoog [27 (link)] medium (MS) was fortified with BAP, KIN and TDZ ranging from 0.5 to 5.0 mgL−1, and 3% (w/v) sucrose (Himedia) as carbon source and 0.8% (w/v) agar (Himedia, India) as gelling agent. The media pH was maintained at 5.65 to 5.75 using 0.1 N NaOH or 0.1 N HCl. The medium (approx. 20–25 mL) was poured into 50 mL culture tubes or 100 mL culture flasks, before autoclaving at 121 °C and 15 psi pressure for 15–25 min The cultures were incubated at 25 ± 2 °C and 55 ± 2% relative humidity under 16/8 h (light/ dark) photoperiod in cool white fluorescent light (1800–2000 lux) intensity for shoot induction. After inoculation, these cultures were maintained for 4 weeks in incubation room. Regenerated multiple shoots were then transferred to the fresh medium after 4 weeks interval for further proliferation and elongation of developed shoots. The shoot multiplication was observed by counting of proliferated shoots. Further sub-culturing was made only on medium which showed maximum shoot multiplication.
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5

Auxin and Ethylene Modulate Crown Root Development

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Rice Rice (O. sativa var IR-64) seeds were dehusked, surface sterilised and germinated on ½ MS media (Himedia) with 1% sucrose (Himedia) and 0.4% clerigel (Himedia) at 28C with the 16h photoperiod. To study the effect of auxin signaling inhibitor on CR development, IR64 seeds were germinated on ½ MS media supplemented with 0.5 M and 1 M NPA (Sigma-Aldrich). The number of crown roots were measured on 6 th day post-germination. Similarly, to analyse the effect of ethylene inhibitors on CR number, IR64 seeds were germinated on media containing 50 M AgNO3, 100 M AgNO3. The number of crown roots were measured on 6 th day and 8 th day post-germination for AgNO3 experiment. Further, we treated the 3 rd day old seedling with 1ppm MCP, a competitive inhibitor of ethylene signaling and the CR number were calculated on 9 th day post-germination. The student t-test was performed on the calculated CR numbers using the data analysis tool in Microsoft excel.
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6

Yeast Growth on Diverse Carbohydrates

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Tannin (gallotannin) was purchased from LOBA Chemie (Mumbai, India), and methyl gallate was purchased from Sigma (Steinheim, Germany). Ingredients such as peptone, yeast extract, malt extract, and carbon sources such as glucose, galactose, sucrose, maltose, lactose, raffinose, and trehalose were purchased from HiMedia (Nashik, India). The genomic DNA of yeast was extracted using a Wizard® Genomic DNA purification kit (Promega Corp., Madison, WI, United States). Nucleic acid amplifications were performed using TaKaRa Ex Taq® (Shiga, Japan). Other reagents and solvents were of analytical grade.
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7

Analytical-Grade Chemicals for Research

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Chemicals used in this study were of analytical grade. Freund’s adjuvants complete and incomplete, electrophoresis reagents were purchased from Sigma Chemical Co. (St. Louis, MO, USA). Agar, brain heart infusion broth (BHI), exogenous dextrose, glucose, sucrose, peptone and maleic acid, NaCl and ethanol were obtained from HiMedia Pvt. Ltd. (Mumbai, India). Sephadex G-200 and all other chemicals used were obtained from E. Merck Pvt. Ltd. (Mumbai, India) or Sisco Research Lab Pvt. Ltd. (Mumbai, India).
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8

Probiotic S. thermophilus Cultivation

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S. thermophilus TISTR 458 was purchased from the Thailand Institute of Scientific and Technological Research (Pathum Thani, Thailand). Standard HA and glucose were purchased from Sigma-Aldrich Chemical Co. (St. Louis, Mo, USA). The sugarcane molasses was obtained from Phitsanulok Sugar Factory (Phitsanulok, Thailand). MRS broth, MRS agar, sucrose and yeast extract were purchased from HiMedia Laboratories (India) and other reagents were of analytical grade and purchased from Merck (Germany).
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9

Rohitukine-Induced Growth Responses in Arabidopsis

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Wild-type A. thaliana seeds (Col-0 background) were used in the experiment. The seeds were surface-sterilized with 70% ethanol, washed with autoclaved double-distilled water and sown on plates containing Murashige and Skoog (MS) basal medium (for media composition, see Table 1), sucrose 1.5% (w/v) and agar 0.6% (w/v) (Hi Media Laboratories Pvt. Ltd. Mumbai, India) [44 (link)], supplemented with appropriate rohitukine concentrations: 0 (control), 0.25 mM, 0.5 mM and 1.0 mM concentrations. For foliar treatment, plants were grown in plastic pots filled with 300 g autoclaved soil mixture (soil rite–sand–soil) at the ratio of (3:1:1). Seeds were kept at 4 °C in the dark for 48 h to ensure homogenous germination. After 48 h, the plates containing seeds were transferred to a growth chamber with the following conditions: photosynthetically active radiation (PAR): 680 μmole/m2/s; temperature: 24 °C; photoperiod light/dark cycles: 16/8 h; and relative humidity: 65%, in the Indian Institute of Integrative Medicine, Jammu and Kashmir, India. The plants grown in soil were irrigated with autoclaved distilled water at intervals of 24 h, while 1 mL of quarter-strength nutrient medium was applied at intervals of 48 h up to five weeks.
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10

Evaluating Enterococcus Biofilm Formation

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The biofilm-forming ability of enterococci was evaluated phenotypically using the Congo red (CR) test, as described previously [39 (link)]. In the CR assay, enterococci strains were cultured on Congo red agar (CRA) plates to determine their biofilm-forming abilities. In order to prepare CRA plates, 0.8 g of CR (HiMedia, Maharashtra, India) and 36 g of sucrose (HiMedia, Maharashtra, India) were mixed with 1000 mL of blood agar (HiMedia, Maharashtra, India). The mixture was then incubated at 37 °C overnight to ensure its sterility. Subsequently, enterococci cultures grown overnight were streaked onto CRA plates and incubated at 37 °C for 24 and 48 h. The observable characteristics of the examined isolates were then analyzed to assess their ability to form biofilms. Isolates displaying dry filamentous crusty black colonies, darkening but lacking the presence of dry crystalline structured colonies, almost black colonies, and red colonies were interpreted as strong, intermediate/moderate, weak, and non-biofilm formers, respectively [40 (link),41 ].
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