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5 protocols using temsirolimus

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Temsirolimus Inhibition in Clonogenic Assays

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The mTOR inhibitor temsirolimus was purchased from Pfizer (New York, NY, USA) and was dissolved in its accompanying diluent to a stock concentration of 10 mM and stored at –20°C. This stock solution was diluted to reach a final concentration of 0.01–10 nM prior to use with culture media, and the cells were exposed to the drug for 48 h prior to clonogenic assays and western blot analyses.
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2

Rhabdomyosarcoma Cell Culture and Treatment

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Normal human smooth muscle (HA-VSMC), RMS (RH30, aRMS), (RD, eRMS) and rhabdoid cell line (A204) cells were procured from American Type Culture Collection (ATCC). While (CW9019, aRMS) and (SMS-CTR, eRMS) cells were gifted to JGP by Dr. Frederic G. Barr, Deputy Branch Chief and Senior Investigator Laboratory of Pathology, National Cancer Institute, USA. RMS cells were cultured in DMEM supplemented with 10% fetal bovine serum, 100 U/ml of penicillin, and 100 μg/ml of streptomycin at 37°C in a humidified atmosphere of 5% CO2. HA-VSMC were grown in F-12K medium supplemented with 0.05 mg/ml ascorbic acid, 0.01 mg/ml insulin, 0.01 mg/ml transferrin, 10 ng/ml sodium selenite, 0.03 mg/ml endothelial cell growth supplement (ECGS); fetal bovine serum to a final concentration of 10%, HEPES to a final concentration of 10 mM, TES to a final concentration of 10 mM. GANT-61 was purchased from Cayman (MI, USA). Rapamycin was purchased from Fujian Kerui Pharmaceutical Co., Ltd (Fuzhou, Fujian, China). Temsirolimus and vincristine were obtained from Pfizer (NY, USA) and Hospira (IL, USA) respectively. Primers used in this study were obtained from Invitrogen (Supplementary Table S1-I and II). Primary antibodies were purchased as described in supplementary Table S2. Various treatments of these cells were performed when their confluence reached to about 70-80%.
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3

Dissolution and Formulation of COTI-2 and Other Anticancer Drugs

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COTI-2, supplied by Cotinga Pharmaceuticals (London, Ontario), was dissolved in 100% dimethyl sulfoxide (DMSO) stock solution and diluted in αMEM or DMEM plus 10% FBS so that final DMSO concentrations were 0.5–1.0%. For the AN3-CA xenograft studies, 235 mg of COTI-2 was mixed with 4.84 g of Captisol® (CydexPharmaceuticals, Lenexa, KS) in 10 ml of sterile water (Hospira, Inc., Lake Forest, IL). For the PANC-1 xenograft studies, COTI-2 was dissolved in phosphate-citrate buffer at pH 2.3.
Cisplatin, 5-FUdR (Sigma-Aldrich, St. Louis, MO), vinorelbine (GlaxoSmithKline, Brentford, UK), temsirolimus, rapamycin (Pfizer, New York, NY), gemcitabine (Eli Lilly, Indianapolis, IN), paclitaxel, carboplatin (Bristol-Myers Squibb Co., New York, NY), and vincristine were obtained from the London Health Sciences Centre Pharmacy (London Regional Cancer Program, London, Ontario). Cetuximab was purchased from ImClone Systems (New York, NY). Erlotinib was obtained from LC Laboratories (Woburn, MA).
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Microfluidic Platform for THP-1 Cells Analysis

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THP-1 cells with GFP tagged
ASC gene were
kindly provided by Prof. Nesrin Özören from the Molecular
Biology and Genetics Department of Boǧaziçi University.
The COP made droplet generation and storage microfluidic devices (115
μm × 115 μm: d × w) (product code: Fluidic 719), fluidic interfaces with the type of
mini luer, and tubings were purchased from Microfluidic ChipShop Company
(Jena, Germany). Temsirolimus and rifabutin were kindly delivered
by Pfizer. BAY 11-7082 was bought from Sigma-Aldrich (Taufkirchen,
Germany). Novec 7500 and Krytox 157 FSH were purchased from 3M and
DuPont, respectively. Necessary chemicals (RPMI 1640, fetal bovine
serum (FBS), MEM Non-Essential Amino acid solution 100× (MEM-Nea),
and penicillin–streptomycin 100× (Pen/Strep)) for medium
preparation were acquired from ThermoFisher Scientific.
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5

Small Molecule Compound Handling

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Crizotinib, temsirolimus and lorlatinib (PF-06463922) were provided by Pfizer Inc., Alectinib (CH5424802) was purchased from Selleck Chemicals. All compounds were dissolved in DMSO (Sigma Chemical Co., St. Louis, MO) to obtain a 10 mmol/L stock solution, aliquoted and stored at −20°C for subsequent use. Tritiated thymidine was from Perkin Elmer (Waltham, MA).
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