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Bransonic 12

Manufactured by Emerson
Sourced in United States

The Bransonic 12 is a benchtop ultrasonic cleaner designed for cleaning a variety of laboratory equipment. It features a 1.25-gallon (4.7-liter) tank capacity and operates at a frequency of 40 kHz. The unit is capable of generating ultrasonic waves to effectively remove contaminants from lab instruments and glassware.

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5 protocols using bransonic 12

1

Characterizing Titanium Particles for Biomedical Research

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We characterized commercially pure titanium particles (Johnson Matthey Chemicals, Ward Hill, MA, USA) in our previous studies, showing a size range considered clinically relevant (size range of 1–15 µm; 75% were < 4 µm in diameter)18 (link),22 (link),23 (link). The titanium particles were sterilized by incubation in isopropanol at RT and dried for 48 h under UV light in a laminar flow hood18 (link),22 (link)–24 (link). The suspensions of titanium particles employed in this study had endotoxin levels of < 0.015 endotoxin units (EU)/mL, as demonstrated using the E-TOXATE assay for detection and semi-quantification of endotoxins (Sigma, Madrid, Spain). We incubated 0.1 mL of the particle suspensions (resuspended in endotoxin-free water at 5 mg/mL) with E-TOXATE reagent at 37 °C for 1 h. Endotoxin-free water and endotoxin standards derived from Escherichia coli were diluted at 0.015–4 EU/mL and incubated in parallel with E-TOXATE reagent. Gel formation was absent in samples that contained endotoxin levels below the detection limit of the assay.
As described in our previous studies18 (link),22 (link),23 (link), the particles were resuspended at 20 mg/mL in growth medium, sonicated for 10 min at maximum power in a bath sonicator (Bransonic 12, Branson Ultrasonidos SAE, Barcelona, Spain) and thoroughly vortexed. Immediately after, the particle suspension was added to the cells.
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2

Encapsulation of Olaparib in Protein Nanoparticles

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HOla was prepared using two different procedures: i) the disassembly/reassembly method22 (link) and ii) the drug complexation with Cu(II)24 (link). i) HFn nanoparticles (2 mg) were disassembled in 1.5 mL of 0.15 M NaCl by raising the pH to 12. Then, Olaparib powder (0.5 mg; Alsachim, C3734) previously solubilized by 1 h of sonication (Bransonic 12, Branson) in NaOH 0.1 M (0.5 mL) was added to the solution of disassembled HFn and incubated for 10 minutes at room temperature (RT). Then, the pH value was lowered to 7.5 using 0.1 M HCl. The resulting solution was stirred at RT for 2 h in order to favor the nanoparticle refolding. The solution was concentrated through a 100 kDa Amicon filter (Millipore) and loaded to Zeba™ Spin Desalting Column (Thermo Fischer Scientific) to remove free Ola. ii) Olaparib powder, solubilized as previously described, was incubated for 10 min at RT with 10 mM CuSO4 obtaining a Cu(II)-Ola complex. The complexed drug was added to HFn (2 mg) and incubated 2 h at RT. HOla was separated from free Ola by a gel filtration to Sephadex G-25 column. The amount of HFn in HOla sample was determined assessing the protein content by Bradford assay, while the amount of encapsulated Ola was determined by quantitative MS analysis, as described below.
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3

Solubilization and Preparation of Freeze-Dried Samples

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The freeze-dried media and cell extract samples were dissolved in equal volume, 200 µL and 400 µL, respectively, of double distilled deionized water. To ensure complete solubilization, samples were subjected to vortexing for 5 min using the Vortex V-1 Plus (Scientifix) and sonication for 10 min (Bransonic 12, Branson) thrice, each followed by centrifugation at 18,000× g for 30 min using a Velocity 15µR Microcentrifuge (Dynamica). Supernatants were transferred to mass spec vials for analysis.
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4

Fullerene Stock Solution Preparation

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Toluene, methanol, isopropanol and acetonitrile (Biosolve, Valkenswaard, The Netherlands) were all analytical grade (LC-MS). Fullerenes C 60 (CAS: 99685-96-8) and C 70 (CAS: 115383-22-7) standards were purchased by Sigma-Aldrich (Steinheim, Germany). Stock solutions of the individual fullerenes, at the concentration of 5 mg/L, were prepared in Toluene and placed on an orbital shaker (Laboshake orbital shaker, Gerhardt, K€ onigswinter, Germany) in the dark overnight. Further solutions needed for the experiments, were obtained by dilution of the stock solutions, and stored at 4 C in the dark and sonicated for 2 min before use (Bransonic 12, Branson, Danbury CT, United States).
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5

Fullerene Extraction and Soil Characterization

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Toluene (analytical grade), methanol (ULC/MS grade) and acetonitrile (LC-MS grade) were obtained from Biosolve B.V. (Valkenswaard, The Netherlands). Fullerenes C 60 (purity >99.9%, CAS: 99685-96-8) and C 70 (purity >99%, CAS: 115383-22-7) were purchased from Sigma-Aldrich (Steinheim, Germany). Stock solutions of the individual fullerenes were prepared in toluene at a concentration of 500 mg/L and placed on an orbital shaker (Laboshake orbital shaker, Gerhardt, K€ onigswinter, Germany) in the dark overnight. Further solutions needed for the experiments were obtained by dilution of the stock solutions and stored at 4 C in the dark and sonicated for 2 min before use (Bransonic 12, Branson, Danbury CT, United States). Quartz sand (silicon dioxide, SiO 2 ) was purchased from Sigma-Aldrich (Zwijndrecht, the Netherlands). The sandy soil consisted of a fullerenes free top-soil (top 10 cm) collected in a natural park in Oude Schulpweg, Castricum, the Netherlands (52 32 0 39.689 00 N, 4 39 0 5.623 00 E). This soil had previously been characterized by our group and had no detectable fullerenes (Carboni et al., 2016b) and 0.2% organic carbon (Carboni et al., 2016a) . The soil was placed in an oven at 65 C for one week in order to remove traces of water and then sieved with a 1.68 mm mesh.
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