The largest database of trusted experimental protocols

4 protocols using ab128995

1

Western Blot Analysis of C. elegans Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Worms were lysed in 1x NuPAGE LDS sample buffer (ThermoFisher Scientific) and heated at 90 °C for 10 min. Any debris was removed by centrifuging at 18,000 × g. ~50 µg of protein extracts was then resolved on precast NuPAGE Novex 4–12% Bis-Tris gels (Invitrogen, NP0321BOX). The proteins were transferred to a nylon membrane with the semidry transfer Pierce Power System (ThermoFisher Scientific) using the pre-programmed method for high-molecular-mass protein. The primary antibodies used included anti-KLP-725 (link) (1:1000 dilution) (a gift from the Desai laboratory), anti-tubulin (Ab6160, Abcam) (1:1000 dilution), anti-GAPDH (Ab125247, Abcam) (1:2000 dilution), anti-PGL-169 (link) (1:2000 dilution) (a gift from the Strome laboratory), anti-PRG-170 (link) (1:2000 dilution) (a gift from the Mello laboratory), anti-Flag (F3165, Sigma) (1:1000 dilution), anti-RPS-3 (ab128995, Abcam) (1:3000 dilution) and the secondary antibodies used included anti-rabbit (31460, Pierce) (1:10000 dilution), anti-mouse (31430, Pierce) (1:10000 dilution) and anti-rat (A9037, Sigma) (1:10000 dilution) HPR antibodies. The SuperSignal West Pico PLUS Chemiluminescent Substrate was used to detect the signal using a ChemiDoc MP imaging system (Biorad).
+ Open protocol
+ Expand
2

Immunofluorescence Staining of Differentiated Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
On Day 7, 105–107 differentiated cells were collected into 2 mL centrifuge tubes, gently mixed with 2 mL Dulbecco’s phosphate-buffered saline (DPBS), and centrifuged at 1,000 × g for 5 min. After washing the cell pellet twice with DPBS, 4% paraformaldehyde was immediately added to fix the cells for 10 min, and this was followed by centrifugation at 1,000 × g for 5 min. The pellet was washed three times with DPBS, and 0.4% Triton X-100 was added for 15 min before centrifuging the cells at 1,000 × g for 5 min. The pellet was washed three times with DPBS, and 5% bovine serum albumin (BSA)-DPBS was added. After centrifugation at 1000 × g for 5 min, primary antibodies against RPS6 (ab80158, Abcam, Cambridge, UK) and RPS3 (ab128995, Abcam) were separately added to the pelleted cells, and they were allowed to stand at 25°C for 2 h. After washing three times with DPBS, a fluorescent-labeled goat anti-rabbit secondary antibody was added, incubated at room temperature for 1 h, and washed three times with DPBS. The cells were then spread evenly and dried on clean glass slides. DAPI was then added, anti-fluorescence quencher coverslips were mounted, and images were captured using an upright fluorescence microscope (LSM710, Zeiss, Germany).
+ Open protocol
+ Expand
3

Optimizing Cell Proliferation and Protein Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Doxycycline (HY-N0565B) and CFSE (HY-D0938) were purchased from Medchem Express (MCE). Bovine serum albumin (BSA, FC0077) and propidium iodide (PI, 219545810) were purchased from MP Biomedicals. RNase A (10406ES03) was purchased from Yeasen Biotechnology. 5-Bromo-2′-deoxyuridine (BrdU, B5002), Hoechst 33342 (B2261), Triton X-100 (T8787), Pyronin Y (213519), and 4′,6-Diamidino-2-phenylindole dihydrochloride (DAPI, D9542) were purchased from Sigma-Aldrich. Paclitaxel was purchased from Beijing SL Pharmaceutical Co., Ltd. (China). Cisplatin was purchased from Jiangsu Hansoh Pharmaceutical Co., Ltd. (China).
Antibodies against SOX1 (ab109290) and RPS3 (ab128995) were purchased from Abcam. Antibody against RPL7A (DF9137) was purchased from Affinity Biosciences. Antibodies against β-actin (60008-1-Ig), Ki-67 (27309-1-AP), and c-MYC (10828-1-AP) were purchased from Proteintech. Antibody against p27 Kip1 (sc-528) was purchased from Santa Cruz Biotechnology. Alexa Fluor 488 cross-adsorbed goat anti-rabbit IgG secondary antibody (A11008) was purchased from Invitrogen.
+ Open protocol
+ Expand
4

Immunofluorescence Staining of Differentiated Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
On day 7, 10 5 -10 7 differentiated cells were collected into 2 mL centrifuge tubes, gently mixed with 2 mL of Dulbecco's phosphate-buffered saline (DPBS), and centrifuged at 1000 ×g for 5 min. After washing the cell pellet twice with DPBS, 4% paraformaldehyde was immediately added to fix the cells for 10 min, followed by centrifugation at 1000 ×g for 5 min. The pellet was washed thrice with DPBS and then 0.4% Triton-X-100 was added for 15 min, before centrifuging the cells at 1000 ×g for 5 min. The pellet was washed with DPBS thrice, and 5% bovine serum albumin (BSA)-DPBS was added. After centrifugation at 1000 ×g for 5 min, primary antibodies against RPS6 (ab80158, Abcam, Cambridge, UK) and RPS3 (ab128995, Abcam) were separately added to the pelleted cells, which were allowed to stand at 25°C for 2 h. After washing with DPBS thrice, fluorescently labeled goat anti-rabbit secondary antibody was added, incubated at room temperature for 1 h, and washed thrice with DPBS. The cells were evenly spread and dried on clean glass slides. DAPI was added, anti-fluorescence quencher coverslips were mounted, and images were photographed using an upright fluorescence microscope (LSM710, Zeiss, Germany).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!