The largest database of trusted experimental protocols

Kapa library quantification dna standards 1 5

Manufactured by Roche

The KAPA Library Quantification DNA Standards #1–5 are a set of five DNA standards used to quantify DNA libraries for next-generation sequencing. The standards provide a range of known DNA concentrations to establish a standard curve for accurate quantification of library samples.

Automatically generated - may contain errors

2 protocols using kapa library quantification dna standards 1 5

1

Library Quantification for NGS Sequencing

Check if the same lab product or an alternative is used in the 5 most similar protocols
Libraries from all experiments were profiled, undiluted, on an Agilent TapeStation 4200 with the High Sensitivity D1000 Reagents (#5067–5585). Libraries to be sequenced were diluted to 1/10,000 concentration by serial 1/100 dilutions and quantified by qPCR with the primers 5′-AATGATACGGCGACCACCGA-3′ and 5′-CAAGCAGAAGACGGCATACGA-3′ at 450nM each, using PowerUp SYBR Green Master Mix (Thermo Fisher Scientific #A25742) and a program of 2min at 50 °C, 2min at 95 °C, then 40 cycles of 15s at 95 °C, 1min at 60 °C. The KAPA Library Quantification DNA Standards #1–5 (Roche #07960387001) were used for the standard curve. The qPCR measurements were scaled by the qPCR’s dilution factor and the TapeStation’s average library molecule lengths to calculate the library molarities used for pooling.
+ Open protocol
+ Expand
2

Library Quantification for Sequencing

Check if the same lab product or an alternative is used in the 5 most similar protocols
Libraries from all experiments were profiled, undiluted, on an Agilent TapeStation 4200 with the High Sensitivity D1000 Reagents (#5067-5585). Libraries to be sequenced were diluted to 1/10,000 concentration by serial 1/100 dilutions and quantified by qPCR with the primers 5′-AATGATACGGCGACCACCGA-3′ and 5′-CAAGCAGAAGACGGCATACGA-3′ at 450 nM each, using PowerUp SYBR Green Master Mix (#A25742; Thermo Fisher Scientific) and a program of 2 min at 50°C, 2 min at 95°C, then 40 cycles of 15 s at 95°C, 1 min at 60°C. The KAPA Library Quantification DNA Standards #1–5 (#07960387001; Roche) were used for the standard curve. The qPCR measurements were scaled by the qPCR’s dilution factor and the TapeStation’s average library molecule lengths to calculate the library molarities used for pooling.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!