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34 protocols using recombinant murine tnf α

1

Murine 3T3-L1 Preadipocyte Differentiation

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Murine 3T3-L1 preadipocytes (obtained from Dr. Howard Green at Harvard University) were grown in Dulbecco’s Modified Eagle’s Media (DMEM) (Sigma-Aldrich, St. Louis, MO) with 10% bovine calf serum. Two days after confluence, the preadipocytes were induced to differentiate using a standard protocol and 3-isobutyl-methylxanthine, dexamethasone, insulin (MDI) induction cocktail plus 10% fetal bovine serum (FBS) in DMEM (Richard et al. 2017 (link)). HyClone calf and fetal bovine serum were purchased from Thermo Scientific (Waltham, MA) or GE Healthcare Life Sciences (Marlborough, MA). The medium was changed every 48–72 hours during growth and differentiation. Cells were serum deprived by changing the medium to DMEM containing 1% calf serum for 16 – 24 h before treatment with murine growth hormone (mGH) or murine TNFα. Recombinant murine GH was obtained from Dr. A.F. Parlow at the National Hormone and Peptide Program (NHPP; Torrance, CA). Recombinant murine TNFα was purchased from Thermo Fisher (Waltham, MA; Cat #: PMC3013).
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2

Murine 3T3-L1 Adipocyte Differentiation

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Murine 3T3-L1 preadipocytes (obtained from Dr. Howard Green at Harvard University) were grown to confluence and differentiated into lipid-laden mature adipocytes as indicated in [27 (link)]. The development of lipid droplets following differentiation was used to consistently confirm the identity of the 3T3-L1 adipocyte cell line. Prior to treatment with murine TNFα, the adipocytes were serum-starved overnight up to 24 h by changing the 10% serum medium to Dulbecco’s Modified Eagle’s Media (DMEM) (Sigma–Aldrich, St. Louis, MO, USA) containing 1% calf serum. Recombinant murine TNFα was purchased from Thermo Fisher (Waltham, MA, USA; Cat #: PMC3013). All cell culture experiments were performed in Corning® Costar® tissue culture (TC)-treated 10 cm or multiwell plates.
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3

Mouse Cell Lines for Cytokine Studies

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Mouse glucagonoma αTC1.6 cells were purchased from the American Type Culture Collection (ATCC). Cells were maintained in Dulbecco's Modified Eagle Medium (DMEM—Sigma-Aldrich, Saint Louis, MO, USA) containing 10% fetal bovine serum (FBS), 2 mM L-glutamine, 0.15% 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES) 15 mM, 1% non-essential amino acids (NEAA), 0.02% bovine serum albumins (BSA, Sigma-Aldrich), 25 mM d-glucose (Sigma-Aldrich), 100 U/ml penicillin, and 100 μg/ml streptomycin, at 37°C, with 5%-CO2 humidified incubator. Mouse insulinoma βTC1 cells were also from ATCC; cells were cultured in DMEM with 25 mM glucose (Sigma Aldrich), supplemented with 2 mM L-Glutamine, 15% horse serum (HS), 2.5% FBS, 1% penicillin/streptomycin, in 95% humidified air, with 5% CO2 at 37°C. Cells were passaged once a week after trypsinization and replaced with new medium twice weekly. Both cell lines were treated with a cytokine cocktail (recombinant murine IL-1β, specific activity 0.1 U/ml, Peprotech, London, UK, UE; recombinant murine IFN-γ, specific activity 25 U/ml, Peprotech; recombinant murine TNF-α, specific activity 25 U/ml, Peprotech), as previously described (22 (link)).
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4

TNF-α Modulation in Skin Inflammation

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C57BL/6 mice were injected intradermally into the ear skin with 200 ng recombinant murine TNFα (PeproTech). For neutralization of TNFα we injected intraperitoneally 100µg anti-TNFα mAb (Epirus Biopharmaceuticals) one day before and on the day of DMBA application or intradermal injection of recombinant murine TNFα. For blocking CCR2 and CXCR3 receptors we injected intraperitoneally 50µg of CCR2 antagonist (RS504393, Tocris Biosciences) and 150µg of CXCR3 antagonist (AMG487, R&D Systems) two times, once 12 h before and the second time during intradermal injection of 200 ng recombinant murine TNFα or topical application of 50µg DMBA.
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5

Comprehensive Apoptosis and Inflammation Assay

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Val-boroPro (MedChemExpress, HY-13233A); AP20187 (MedChemExpress, HY-13992); Poly dA:dT (Sigma-Aldrich, P0883); Lipopolysaccharides from Escherichia (E.) coli K-235 (Sigma-Aldrich, L2018); z-VAD-fmk (R&D Systems, FMK001); recombinant mouse M-CSF (R&D Systems, 416-ML); Bacto-thioglycolate medium without dextrose (Difco, 0363-17-2); SUPERFASLIGAND Protein (Enzo Life Sciences, ALX-522-020-C005); Recombinant Murine TNF-α (PeproTech, 315-01A); nigericin (Cayman CHEMICAL, 11437); and Puromycin aminonucleoside (Focus Biomolecules, 10-2101) were purchased. YO-PRO-1 Iodide (Y3603), Blasticidin S (R21001), and Geneticin (11811023) were purchased from Thermo Fisher Scientific. CA-074 Me (4323-v), E-64-d (4321-v), and Pepstatin A (4397-v) were purchased from Peptide Institute (Osaka, Japan).
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6

Murine TNF-α and FMN Assay Protocol

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FMN was purchased from Dalian Meilun biotechnology co., Ltd. (CAS 485‐72‐3; molecular formula: C16H12O4; molecular weight: 268.27; purity >98%, Dalian, China). Recombinant murine TNF‐α was purchased from Pepro Tech (Catalog Number: 315‐01A; USA).
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7

Evaluating Activin A, TNF-α, and SDF-1α Signaling

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Recombinant human/mouse/rat activin A was provided by R&D systems (Minneapolis, MN, USA). Recombinant murine TNF-α and recombinant murine SDF-1α (CXCL12) were obtained by PeproTech (Rocky Hill, NJ, USA). Cell Counting Kit-8 (CCK-8) was bought from GlpBio Biotechnology Co. (Shanghai, China). NO detection kit was purchased Beyotime Biotechnology Co. (Shanghai, China). Enzyme-linked immunosorbent assay (ELISA) kit for TGF-β1 was obtained from eBioscience (San Diego, USA); ELISA kit for IL-6 was provided by R&D systems (Minneapolis, MN, USA). Reverse transcription-PCR (RT-PCR) kit was purchased from Takara Biotechnology Co. (Dalian, China). The antibodies used for Western blotting were as follow: ActRIIA (Absin), Smad3 (Immunoway), p-Smad3 (Abcam), ERK1/2 and p-ERK1/2 (Cell Signaling), MMP-2 (Absin), MMP-9 (Absin) and GAPDH (Absin).
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8

Reagents and Materials for Cell Assays

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RPMI1640 medium, trypsin, Triton X-100, Brij 35, TriReagent and hexadimethrine bromide were purchased from Sigma-Aldrich (St. Louis, MO, USA). Nonidet P-40 was from Nacalai Tesque (Kyoto, Japan). Bovine serum albumin (BSA), gelatin, dimethyl sulfoxide (DMSO), phorbol 12-myristate 13-acetate (PMA) and polyethylene glycol (PEG) 6000 were purchased from Wako Pure Chemical Industries (Osaka, Japan). Polyethylenimine “Max” was purchased from Polysciences Inc. (Warrington, PA, USA). Fetal calf serum (FCS) was obtained from Biosera (Boussens, France). ASF104 serum-free medium was supplied by Ajinomoto (Tokyo, Japan). Matrigel was purchased from BD Biosciences (San Diego, CA, USA). The PrimeScript RT Reagent Kit and KAPA SYBR FAST qPCR Kit Master Mix (2×) ABI Prism were obtained from Takara Bio Inc. (Shiga, Japan) and KAPA Biosystems (Boston, MA, USA), respectively. ViraPower Lentiviral Packaging Mix and puromycin dihydrochloride were supplied by Life Technologies (Carlsbad, CA, USA). Oligonucleotides were supplied by FASMAC (Kanagawa, Japan). Recombinant murine TNF-α was a product of Peprotech (Rocky Hill, NJ, USA). A fluorescent dye, 3′-O-acetyl-2′, 7′-bis(carboxyethyl)-4 or 5-carboxyfluorescein, diacetoxymethyl ester (BCECF-AM), was obtained from Dojindo Laboratories (Kumamoto, Japan). Gelatin Sepharose 4B was a product of GE Healthcare (Piscataway, NJ, USA).
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9

Murine Bone Marrow Dendritic Cell Culture

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Mouse bone marrow (BM) cells were flushed from femurs and tibias and plated at 106 cells/ml in RPMI (Invitrogen) supplemented with 10% fetal calf serum (PAA, UK), L-glutamine (2mM), penicillin (100U/mL), streptomycin (100μg/mL)(Sigma) and 20ng/ml recombinant murine GM-CSF (Peprotech) for 7 days. Non-adherent cells were re-plated and medium supplemented on days 2 and 4. On day 7, cells were re-plated at 106 cells/ml and matured with 100ng/ml ultra-pure LPS (Source Bioscience) and 50ng/ml recombinant murine TNF-α (Peprotech) for 24 hours.
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10

Immunoblotting Reagents and Antibodies

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Mouse monoclonal antibodies to Myc epitope and to HA epitope were purified from 9E10 and 12CA5 hybridoma cells, respectively. Rabbit monoclonal antibodies to Flag, to HA, to Myc, to phospho-p65 (Ser536), and to p65, rabbit polyclonal antibody to IκBα, and mouse monoclonal antibody to phospho-IκBα (Ser32/36) were from Cell Signaling Technology (USA). Mouse monoclonal antibodies to linear ubiquitin, to RIP1, and to cIAP were from Millipore (USA), BD Transduction Laboratories (USA), and R&D Systems (USA), respectively. Mouse monoclonal antibodies to GAPDH, to HOIL-1L, to TSG101, to NEMO, to TNF-R1, and ubiquitin as well as rabbit polyclonal antibodies to TRAF2, to NEMO, and to GST were from Santa Cruz Biotechnology (USA). Rabbit polyclonal antibody to HOIP was from Abcam (UK). Rabbit polyclonal antibodies to SHARPIN and to TSG101 were from Proteintech Group (USA). Mouse IgG, rabbit IgG, and mouse monoclonal antibodies to Flag were from Sigma. Recombinant murine TNFα was purchased from Peprotech (USA).
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