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3 protocols using tnf a pacific blue

1

Multiparameter Flow Cytometry of Immune Cells

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The following monoclonal antibodies reactive with human species were used for staining: CD8-VioGreen (BW135/80, cat.: 130-113-726, 1:50), CD4-APC-Vio770 (VIT4, cat.: 130-113-211, 1:50), CD154/CD40L-PE-Vio770 (5C8, cat.: 130-096-793, 1:10), CD20-VioGreen (LT20, cat.: 130-113-379, 1:50), CD14-VioGreen (TÜK4, 130-113-153, 1:50) (all from Miltenyi Biotec, Bergisch Gladbach, Germany);
IL-13-FITC (PVM13-1, cat.: 11-7139-42, 1:20 or 85BRD, cat.: 11-7136-42, 1:20), IL-4-PE (8D4-8, cat.: 12-7049-42, 1:20) (all from Thermo Fisher Scientific); TNFa-Pacific Blue (MAb11, cat.: 502920, 1:100), IFNg-PerCp-Cy5.5 (4S.B3, cat.: 502526, 1:20), CD3-APC (Okt3, cat.: 17-0037-42, 1:50) (all from Biolegend, San Diego, CA, US). Fixation and permeabilization were performed using the Foxp3 Transcription Factor Staining Buffer Set (Thermo Fisher Scientific) according to the manufacturer’s suggestions followed by intracellular cytokine and CD154/CD40-L staining. Fixable viability dye was used in eFluor-506 (cat.: 65-0866-14, 1:1000, Thermo Fisher Scientific).
Cells were acquired using BD FACSCanto II (with Diva software, Heidelberg, Germany) and post-acquisition data analysis was carried out using FlowJo software (TreeStar, Ashland, OR, US).
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2

Characterization of CAR T Cell Activation

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Cells were stimulated with Nalm-6 target cells at an E:T ratio of 1:1. Transduction rates were normalized by adding untransduced T cells. 24 hours later, eBioscience Brefeldin A Solution (1000X) was added and incubated for 4 hours at 37°C. Cells were stained with extracellular antibodies eBioscience Fixable Viability Dye eFluor 780 (Thermo Fisher Scientific), CD25 PE-Cy7 (BD), CD69 PerCP (BioLegend), 4-1BB BV711 (BioLegend) and intracellular antibodies TNF-a Pacific Blue (BioLegend), IL-2 APC (BD) and IFN-g FITC (BioLegend) using the FIX & PERM Cell Fixation & Cell Permeabilization Kit (Thermo Fisher Scientific). CAR samples were gated on mCherry+ cells. Measurement was performed on an Attune NxT Flow Cytometer (Thermo Fisher Scientific).
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Characterization of CAR T Cell Activation

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Cells were stimulated with Nalm-6 target cells at an E:T ratio of 1:1. Transduction rates were normalized by adding untransduced T cells. 24 hours later, eBioscience Brefeldin A Solution (1000X) was added and incubated for 4 hours at 37°C. Cells were stained with extracellular antibodies eBioscience Fixable Viability Dye eFluor 780 (Thermo Fisher Scientific), CD25 PE-Cy7 (BD), CD69 PerCP (BioLegend), 4-1BB BV711 (BioLegend) and intracellular antibodies TNF-a Pacific Blue (BioLegend), IL-2 APC (BD) and IFN-g FITC (BioLegend) using the FIX & PERM Cell Fixation & Cell Permeabilization Kit (Thermo Fisher Scientific). CAR samples were gated on mCherry+ cells. Measurement was performed on an Attune NxT Flow Cytometer (Thermo Fisher Scientific).
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