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7 protocols using alexa flour 594 goat anti rabbit igg

1

Quantitative SARS-CoV-2 N-protein Immunoassay

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MRC5 cells were grown to confluence in a 96-well dish and infected with mock or OC43 at an MOI of 0.01 or 1. At 48 h post infection, cells were washed 3x with PBS and fixed with 2% paraformaldehyde in PBS for 15 min at room temperature. Cells were washed 3x with PBS and permeabilized with PBS containing 0.1% TritonX-100 for 15 min at room temperature. Cells were blocked with PBS containing 2% BSA and 0.05% Tween-20 for 1 h at room temperature. N-protein antibody (Sino Biological #40068) was prepared to 1:1000 dilution in PBS containing 0.5% Tween-20 and added to each well for 1 h. Cells were washed 3x with PBS containing 0.01% Tween-20. Secondary antibody (alexa flour 594 goat-anti-rabbit IgG, Invitrogen #a-11012) was prepared to 1:1000 in PBS containing 0.5% Tween-20 and added to each well for 1 h. Cells were washed 3x with PBS containing 0.05% Tween-20, Hoeschet stain (1:1000) was added to the final wash of PBS. Cells were imaged using the Cytation 5 imaging reader (BioTek). Each well was imaged using a 20X magnification objective lens with a predefined DAPI channel (described above) and predefined Texas Red channel with an excitation wavelength of 586 nm and emission wavelength of 603 nm.
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2

Indirect Immunofluorescence Staining of Influenza Proteins

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For indirect immunofluorescence staining, cells were fixed with 4% formaldehyde for 15 min, permeabilized with 0.1% Triton X-100 for 15 min, blocked with 1% BSA for 60 min, and then probed with the indicated primary antibodies, including mouse monoclonal anti-IAV NP antibody (1331, 1:200, ViroStat, Portland, ME, USA), rabbit anti-human galectin-3 antibody (sc-20157, 1:200, Santa Cruz), rabbit anti-influenza A PA antibody (GTX125932, 1:500, GeneTex), and mouse monoclonal anti-Flag M2 antibody (F1804, 1:500, Sigma-Aldrich), overnight at 4 °C. Alexa Flour 488-goat anti-mouse IgG (A-21202, 1:200, Invitrogen) and Alexa Flour 594-goat anti-rabbit IgG (A-11012, 1:200, Invitrogen) were used as secondary antibodies. The nuclei were counterstained with DAPI (Sigma-Aldrich). Images were acquired using an Olympus FV1000 confocal microscope or observed under fluorescence microscopy (Olympus, Tokyo, Japan).
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3

Co-Immunostaining of FFPE Tissue Sections

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We performed co-immunostaining for FFPE sections as described in previous publications [10 (link),24 (link)]. Briefly, we performed deparaffinization, hydration, antigen retrieval and blocking of endogenous peroxidase activity and non-specific binding as described in the immunohistochemical staining section above. We prepared the primary antibodies in 5% goat serum as follows: ARP2/3 1:300 (Bioss, Laval, QC, Canada, #bs-12524R) and Tie2 1:400 (Invitrogen, Burlington, ON, Canada, # PA5-28582). The sections were incubated with the primary antibodies at 4°C overnight. Next day, the sections were washed and incubated with a mixture of secondary antibodies for 2 h. The secondary antibody mixture was composed of 5% goat serum containing the following antibodies: Alexa Flour 594 goat anti-rabbit IgG 1:500 (Invitrogen, Burlington, ON, Canada, #A11037) and Alexa Flour 488 goat anti-mouse IgG 1:500 (Invitrogen, Burlington, ON, Canada, #A10680). Next, the sections were washed and incubated with DAPI (1:1000 in 1× PBS) for 10 min. The sections were then protected with coverslips using ProLong Mountant (Thermo Fisher Scientific, Saint-Laurent, QC, Canada, #P36934).
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4

Indirect Immunofluorescence of Viral Proteins

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At 24 hours post transfection, cells were fixed with cold 95% EtOH/5% acetic acid. Cells were blocked with 5% goat serum in PBS, and then coverslips were co-stained for indirect immunofluorescence with 1:500 dilution of rabbit anti-VP2/3 and/or 1:200 mouse anti-VP1 in goat serum. Secondary antibodies Alexa Flour® 594 goat anti-rabbit IgG or Alexa Fluor® 488 goat anti-mouse (Invitrogen) were used at a 1:200 dilution. Cells were imaged with an inverted fluorescence microscope.
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5

Localization and Expression of Cytoskeletal and Nuclear Proteins

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Localization of endogenous transgelin in RKO, SW480, HCT116 and LOVO cell lines and the expression of PARP1 in RKO cells were determined by immunofluorescence. The primary antibody (anti-transgelin, 1:500, Abcam, USA; anti-PARP1, 1:500, Cell signaling technology, USA), secondary antibody (Alexa Flour 594 goat anti-rabbit IgG, Alexa Flour 488 goat anti-rabbit IgG, 1:500, Invitrogen, USA), and the VECTASHIELD mounting medium (Vector Laboratories, USA)) with 4′, 6-diamidino-2-phenylindole (DAPI) were used. The immunofluorescence images were taken and preserved under the laser scanning confocal microscope using a 63 × oil-immersion objective lens (Carl Zeiss, USA).
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6

Subcellular localization of transgelin in colorectal cancer cells

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Localization of endogenous transgelin in RKO, SW480, HCT116 and LOVO cell lines was determined by immuno uorescence. The primary antibody (anti-transgelin, 1:500, Abcam, USA), secondary antibody (Alexa Flour 594 goat anti-rabbit IgG, 1:500, Invitrogen, USA), and the VECTASHIELD mounting medium (Vector Laboratories, USA)) with 4′,6-diamidino-2-phenylindole (DAPI) were used. The immuno uorescence images were taken and preserved under the laser scanning confocal microscope (63× oil lens, Carl Zeiss, USA). Transfection SW480 and RKO cells were cultured in 12-well plates and transfected with pcDNA6/myc-His B-TAGLNag plasmid and pcDNA6/myc-His B-ag plasmid (Takara, Japan). In the validation experiment, we transfected the RKO cells with pENTER-TAGLN-Flag and pENTER-Flag control plasmid (Vigene Biosciences, USA). Transfection was conducted using Lipofectamine 2000/ Lipofectamine 3000 (Thermo Fisher Scienti c, USA). The cells were harvested at 48 hours after transfection for further analysis.
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7

Localization and Transfection of Transgelin

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Localization of endogenous transgelin in RKO, SW480, HCT116 and LOVO cell lines was determined by immuno uorescence. The primary antibody (anti-transgelin, 1:500, Abcam, USA), secondary antibody (Alexa Flour 594 goat anti-rabbit IgG, 1:500, Invitrogen, USA), and the VECTASHIELD mounting medium (Vector Laboratories, USA)) with 4′,6-diamidino-2-phenylindole (DAPI) were used. The immuno uorescence images were taken and preserved under the laser scanning confocal microscope (63 × oil lens, Carl Zeiss, USA). Transfection SW480 and RKO cells were cultured in 12-well plates and transfected with pcDNA6/myc-His B-TAGLNag plasmid and pcDNA6/myc-His B-ag plasmid (Takara, Japan). In the validation experiment, we transfected the RKO cells with pENTER-TAGLN-Flag and pENTER-Flag control plasmid (Vigene Biosciences, USA). Transfection was conducted using Lipofectamine 2000/ Lipofectamine 3000 (Thermo Fisher Scienti c, USA). The cells were harvested at 48 hours after transfection for further analysis.
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