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2 protocols using safeclear xylene substitutes

1

Tissue Staining Chemicals and Protocols

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Chemicals used for the staining of tissue sections were as follows: hydrogen peroxide, hydrochloric acid (HCl), methanol, Permount, polyvinylpyrrolidone (PVP) (Cat.#BP431-100), SafeClear Xylene Substitutes, Triton X-100, and potassium ferrocyanide trihydrate (Cat.#S25489) were purchased from Fisher Scientific (Hanover Park, IL). Sodium azide, sodium borohydride, proteinase K, phosphate-buffered saline (PBS), Trizma base, and 3,3′-diaminobenzidine tetrahydrochloride (DAB) (Cat.#D5905) were purchased from Sigma (St. Louis, MO). Chemicals used for test tube studies were as follows: Ferric iron solution (iron Standard for AAS, 1,000 mg/L Fe in nitric acid), Sodium azide, and DAB were purchased from Sigma-Aldrich (Oakville, Ontario, Canada), whereas K4Fe(CN)6 (EM Science), TRIS (EM Science), HCl (BDH), and H2O2 (BDH) were purchased from VWR (Mississauga, Ontario, Canada). Proper attention to safety is required when handling these chemicals.
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2

Evaluating Apoptosis in SPARCLE KO-HCT116 Tumors

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Slides of paraffin-embedded sections of WT- and SPARCLE KO-HCT116 cells-derived tumors were assessed for TUNEL using the TUNEL assay kit-HRP-DAB (ab206386, Abcam) following the manufacturer’s protocol, except for substitution of xylene with SafeClear Xylene Substitutes (23–314629, Fisher Scientific) for sample rehydration and counterstaining. TUNEL signal was analyzed using an Eclipse TE300 inverted microscope (40X, Nikon).
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