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Nbd phallacidin

Manufactured by Thermo Fisher Scientific
Sourced in Italy

NBD-phallacidin is a fluorescent dye that is used to label and visualize actin filaments in cells. It binds to actin and emits a fluorescent signal, allowing researchers to observe the distribution and dynamics of the actin cytoskeleton.

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3 protocols using nbd phallacidin

1

Measuring F-Actin in Leukocytes by Flow Cytometry

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F-actin was measured in unfractionated leukocytes prepared as described above. The leukocytes were first incubated for 30 min on ice with allophycocyanin-labeled anti-CD49d (BioLegend, San Diego, CA). After washing with PBS, the cells were suspended in PBS containing Ca++ (1.8 mM) and Mg++ (1 mM) at a concentration of 5.5 × 106 cells/ml. Aliquots (100 μl) of the fluorescently labelled cells were then preincubated for 5 min at 37 °C with vehicle (1 μl DMSO) or different concentrations of 53, 34, or Gue1654, followed by addition of either vehicle (10 μl PBS containing Ca++, Mg++, and 0.1% BSA) or 5-oxo-ETE (final concentration, 10 nM). After 20 s, the incubations were terminated by addition of formaldehyde (37%) to give a final concentration of 8.5%, and kept on ice for 30 min. A mixture of lysophosphatidylcholine (30 μg in 23.8 μl PBS) and N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)phallacidin (NBD-phallacidin; Molecular Probes; 49 pmol in 6.2 μl methanol; final concentration, 0.3 μM) was added to each sample 33 (link), followed by incubation overnight in the dark at 4 °C. Immediately prior to data acquisition by flow cytometry (FACSCalibur, BD Biosciences, San Jose, CA), 200μl PBS containing 1% formaldehyde was added to each sample. Eosinophils were identified by high side scatter and high expression of CD49d, whereas neutrophils displayed high side scatter but low CD49d expression.
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2

Microscopic Analysis of Cell Adhesion

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B16/F10 cells (3 × 105) were plated at 37 °C on eight-chamber culture slides (BD Biosciences) coated with C1q (20 μg ml−1), FN (20 μg ml−1), FN+C1q (20 μg ml−1 each) or poly-lysine (PolyLys; 70 μg ml−1) and left to adhere for 30 min. The cells were fixed and permeabilized with the FIX & PERM Cell Permeabilization Kit (Società Italiana Chimici, Italy), stained with N-(7-nitrobenz-2-oxa-1,3-diazol-4-y)-conjugated phallacidin (NBD-phallacidin) (Molecular Probes, Invitrogen 1:50 dilution) and mouse monoclonal anti-paxillin (Merck-Millipore, clone 5H11, 1:100 dilution) followed by Cy3-conjugated F(ab′)2 goat anti-mouse IgG (Jackson ImmunoResearch Catalogue number 115-166-062, 1:300 dilution) as previously described39 (link)66 (link). Images were acquired with the Leica TCS SP2 confocal system (Leica Microsystems) using the Leica Confocal Software and a 633 fluorescence objective on a Leica DM IRE2 microscope (Leica Microsystems) or with a Nikon C1Si confocal system, using the Nikon EZ-C1 Confocal Software and a 633 fluorescence objective on a Nikon TE2000-U inverted microscope (Nikon, Melville, NY).
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3

Quantifying Mesothelial Cell F-Actin Content

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Mesothelial cells were stained with nitrobenzoxadiazole (NBD)-phallacidin (Molecular Probes, Junction City, OR) and analyzed with a FACScan (Becton Dickinson Immunocytometry System, Mountain View, CA) (Howard and Oresajo, 1985 (link)) with following some modifications. In all cases a two-step stain procedure was used. Mesothelial cells suspensions (1 × 106 cells/ml) were incubated at the desired time in HBSS with and without agents; fixed with formalin (3.7% vol/vol) for 15 min at 25°C; and then exposed to a final concentration of 100 μg/ml lysophosphatidyl choline and 1.65 × 10−7 M NBD-phallacidin. Stained cells were analyzed by FACScan within 1 h of staining. In all instances the fluorescence histogram of cells yielded a normal distribution, and the fluorescence was recorded as the peak fluorescence channel number. The relative F-actin content is expressed as the ratio of the agents treated peak channel number to the control peak channel number.
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