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Any kd tgx sds page gels

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Any-kD TGX-SDS-PAGE gels are pre-cast polyacrylamide gels designed for sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) separation of proteins. The gels feature a uniform resolving gel matrix that can separate a wide range of protein molecular weights without the need for multiple gel types.

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2 protocols using any kd tgx sds page gels

1

ICP1 capsid protein detection in V. cholerae

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Isogenic V. cholerae strains either lacking PLE or with an integrated PLE (PLE1 to -5) were grown to an OD600 of 0.3 and infected with ICP1_2006E ΔCRISPR Δcas2-3 at an MOI of 1 and returned to the incubator at 37°C with aeration. At 16 min after phage addition, 1 ml of infected culture was collected and mixed with an equal volume of ice-cold methanol. Samples were centrifuged at 5,000 × g for 10 min at 4°C to pellet infected cells. Pellets were washed once with ice-cold PBS and resuspended in lysis buffer (50 mM Tris, 150 mM NaCl, 1 mM EDTA, 0.5% Triton X-100, 1× protease inhibitor [Thermo Pierce Protease and Phosphatase inhibitor tablet]). Protein concentration was quantified with a Pierce bicinchoninic acid (BCA) protein assay kit (Thermo). Thirty micrograms of total protein sample was mixed with Laemmli buffer (Bio-Rad) and boiled at 99°C for 10 min. Samples were run on Any-kD TGX-SDS-PAGE gels (Bio-Rad) and transferred to nitrocellulose membranes with a Transblot Turbo Transfer system (Bio-Rad). Custom primary peptide antibody generated in rabbits against ICP1 capsid (Gp122, YP_004251064.1) (GenScript) was diluted 1:1,500. Band detection was conducted with a goat anti-rabbit IgG horseradish peroxidase (HRP) secondary antibody (Bio-Rad) at 1:10,000 followed by development with Clarity Western ECL substrate (Bio-Rad) and imaging on a ChemiDoc XRS imaging system (Bio-Rad).
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2

Quantitative Immunoblotting of V. cholerae Phage Infection

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V. cholerae host strains were grown to OD600 = 0.3 as described above. Cultures were infected with phage at an MOI = 1 and returned to incubate at 37°C with aeration. At each time-point, a 1 ml sample was collected from the infection and mixed with an equal volume of ice-cold methanol. Samples were centrifuged at 5000 × g for 10 min at 4°C to pellet. Pellets were washed once with ice-cold PBS and resuspended in cold lysis buffer (50 mM Tris, 150 mM NaCl, 1 mM EDTA, 0.5% Triton X-100, 1× Pierce™ Protease Inhibitor Mini Tablet (Thermo)). Protein concentration was quantified with Pierce BCA Protein Assay Kit (Thermo), and 30 μg of total protein per sample was mixed with Laemmli buffer supplemented with 2-mercaptoethanol (10%) (Bio-Rad) and boiled at 99°C for 10 min. Samples were run on Any-kD TGX-SDS-PAGE gels (Bio-Rad) and transferred onto nitrocellulose membranes with Transblot Turbo Transfer system (Bio-Rad). Custom primary peptide antibody generated in rabbits against ICP1 capsid (GenScript) was diluted 1:1500 and applied to the membrane for >3 h. Band detection was conducted with a goat α-rabbit-HRP secondary antibody (Bio-rad) at 1:10 000 followed by development with Clarity Western ECL Substrate (Bio-Rad) and imaging on a Chemidoc XRS Imaging System (Bio-Rad). Band quantification from biological triplicate experiments was conducted using ImageJ (https://imagej.nih.gov/ij/).
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