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6 protocols using spectrostar nano mars v3

1

Effects of PDE-EVs on Cell Proliferation

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P-MCs, PDE-FBs, and P-FBs were seeded into 96-well plates at a density of 4 × 103 cells/well. MTT assays were performed on 30 v/v% PDE, 10 ng/mL PDGF-B (R&D Systems, USA), or 10 ng/mL TGF-β (R&D Systems, USA)-treated P-MCs, PDE-FBs, or P-FBs (n = 5 well/treatment group) in the absence or presence of 4.5 × 109–1010 particles/mL PDE-EVs according to the instructions of the manufacturer (MTT Cell Proliferation/Viability Assay kit, R&D Systems, USA). Absorbance was recorded at 570 nm and at 690 nm as background in a SPECTROstar Nano microplate reader using SPECTROstar Nano MARS v3.32 software (BMG Labtech, Ortenberg, Germany). Vehicle-treated cells (4 mM hydrogen chloride (HCl) in case of PDGF, TGF-β, 30 v/v% 1.5% glucose-containing peritoneal dialysis fluid (Fresenius Medical Care, UK) in the case of PDE and PBS in the case of EV) served as controls. Results were normalized and determined as the percentage ratio of control group values.
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2

Colorimetric Cell Proliferation Assay

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The rate of cell proliferation was determined by a colorimetric method, based on the intracellular mitochondrial dehydrogenase activity of the attached cells. Then, 10 μL of MTT reagent, containing 5 mg/mL thiazolyl blue tetrazolium bromide (diluted in sterile H2O) was added into each well including cells and 100 μL of supernatant as well, then incubated at 37 °C for 4 h. Thereafter, the supernatants were removed from cells using a pipette, and the intracellular MTT crystals were dissolved by adding 100 μL 1:1 mixture of DMSO and ethanol (all reagents were purchased from Merck Life Science Kft. Budapest, Hungary). Absorbance was recorded at 570 nm and 690 nm as background in a SPECTROstar Nano microplate reader using SPECTROstar Nano MARS v3.32 software (BMG Labtech, Ortenberg, Germany) [66 (link)].
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3

Collagen Deposition Quantification via SiriusRed

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The collagen deposition was determined based on a basic histological dye SiriusRed, incorporated into the triple helical collagen molecules [50 (link)]. After removing supernatants, cells were incubated in a fixative solution containing 26% EtOH, 3.7% formaldehyde, and 2% glacial acetic acid for 15 min at room temperature. Samples were stained for 1 h at room temperature with 0.1% solution of SiriusRed (DirectRed80, Merck Life Science Kft., Budapest, Hungary) dissolved in 1% acetic acid, then washed three times with 200 μL of 0.1 M HCl, and finally the bounded dye was dissolved by adding 100 μL of 0.1 M NaOH (all reagents were purchased from Merck Life Science Kft. Budapest, Hungary). Absorbance was recorded at 544 nm and 690 nm as background in a SPECTROstar Nano microplate reader using SPECTROstar Nano MARS v3.32 software (BMG Labtech, Ortenberg, Germany) [66 (link)].
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4

Quantifying Cell Death via LDH Assay

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The extent of cell death was determined by a colorimetric method, based on the lactate dehydrogenase (LDH) enzyme activity in the supernatant, released from damaged cells [48 (link)]. Equal volumes (40 μL) of aspired media were mixed in a sterile 96-well plate with LDH reagent, containing 109 mM lactate, 3.3 mM ß-nicotinamide-adenine-dinucleotide-hydrate (#N7004), 2.2 U/mL diaphorase (#D2197), 3 mM TRIS, 30 mM HEPES, 10 mM NaCl, 350 μM thiazolyl blue tetrazolium bromide (all reagents were purchased from Merck), then incubated at 37 °C for 1 h. Absorbance was recorded at 570 nm and at 690 nm as background in a SPECTROstar Nano microplate reader using SPECTROstar Nano MARS v3.32 software (BMG Labtech, Ortenberg, Germany).
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5

Quantifying Fibrillar Collagens via Sirius Red

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To investigate the amount of fibrillar collagens, Sirius Red assay was performed (n = 5-well/treatment group). After 48 h of 30 v/v% PDE, 10 ng/mL TGF-β or 10 ng/mL PDGF-B treatment in the presence or absence of 4.5 × 109–1010 particles/mL EVs P-MCs, PDE-FBs, or P-FBs were incubated in a fixative solution containing 26% ethanol, 3.7% formaldehyde, 2% glacial acetic acid for 15 min at room temperature. Samples were stained for 1 h at room temperature with a 0.1% solution of Sirius Red (DirectRed80) dissolved in 1% acetic acid, and then washed three times with 200 μL of 0.1 M HCl, and finally the bounded dye was dissolved by adding 100 μL of 0.1 M NaOH (all reagents were purchased from Merck, Germany). Absorbance was recorded at 544 nm and at 690 nm as background in a SPECTROstar Nano microplate reader using SPECTROstar Nano MARS v3.32 software (BMG Labtech, Germany). Vehicle-treated (4 mM HCl in the case of TGF-β, 30% PDF the in case of PDE, and PBS in case of EV) cells served as controls. Results were normalized and determined as a percentage ratio of the control group values.
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6

Cell Death Quantification by LDH Assay

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The extent of cell death was determined by a colorimetric method, based on the lactate dehydrogenase (LDH) enzyme activity in the supernatant, released from damaged cells [66 (link),67 (link)]. Equal volumes (40 μL) of aspired media were mixed in a sterile 96-well plate with LDH reagent, containing 109 mM lactate, 3.3 mM ß-nicotinamide-adenine-dinucleotide-hydrate (N7004), 2.2 U/mL diaphorase (D2197), 3 mM TRIS, 30 mM HEPES, 10 mM NaCl, 350 μM thiazolyl blue tetrazolium bromide (all reagents were purchased from Merck Life Science Kft. Budapest, Hungary), then incubated at 37 °C for 1 h. Absorbance was recorded at 570 nm and 690 nm as background in a SPECTROstar Nano microplate reader using SPECTROstar Nano MARS v3.32 software (BMG Labtech, Ortenberg, Germany).
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