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3 protocols using st6gal 1

1

Quantifying Apoptosis Signaling Pathways

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SW620 and SW837 cells were lysed in radioimmunoprecipitation assay buffer and Halt protease and phosphatase inhibitor cocktail (Fisher Scientific) 1 or 5 days after treatment. PDX model tumors were harvested and dissociated 1 week after completion of treatment. Samples then underwent electrophoresis and protein transfer to polyvinylidene fluoride membranes. Membranes were blocked in 5% nonfat dry milk in 1× Tris-buffered saline and 0.1% Tween-20. Blots were probed with 1:1000 antibodies against ST6GAL-1 (R&D Systems), (1:200) cleaved caspase 3 (Cell Signaling Technology), and (1:300) TNFR1 (Cell Signaling Technology). Protein loading was verified using 1:10,000 β-actin (Abcam). Membranes were incubated with horse antigoat IgG secondary antibody for ST6GAL-1 (R&D Systems) and biotinylated rabbit secondary for cleaved caspase 3 (Vector Labs) and rabbit monoclonal antibody for TNFR1 (Santa Cruz) and imaged using enhanced chemiluminescence.
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2

Sialyltransferase Antibody Staining

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Monoclonal or polyclonal antibodies to the following sialyltransferases were purchased from the following companies with antibodies used at recommended concentrations: β4GALT1 (Sigma) 1:100; β4GALNT2 (Abnova) 1:200; ST3GAL3 (Novus) 1:200; ST3GAL4 (Novus) 1:100; ST3GAL6 (Novus) 1:200; ST6GAL1 (R&D) 1:50; ST6GALNAC1 (Novus) 1:500, and ST6GALNAC2 (Novus) 1:1000. If antigen retrieval resulted in a clear background, citrate buffer was utilized. Detection was with either alkaline phosphatase or Vector Red as detailed previously.
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3

Recombinant Glycosylation Enzymes Protocol

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Recombinant CK2, B4GalT1, ST6Gal1, PGK1, HK1, HK2, AKT1, FUT8, HIF1α, SREBP1c, NOD2, G6PD, PFKFB3, PFKFB4, PGK1, and PKM were from R&D Systems, Bio-techne. Alkyne-Alexa Flu-or® 488, alkyne-Alexa Fluor® 555 were from Thermo Fisher Scientific. Cy5-alkyne, MG132, Flag-Beads and FLAG peptide were purchased from Sigma-Aldrich. Fluorophore-conjugated CMP-Sialic acids were prepared as previously described 1 .
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