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3 protocols using collagenase d and a

1

Isolation and Analysis of Lung Immune Cells

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Mouse lungs perfused with PBS were minced and digested with Collagenase D and A (1 mg/mL each, Roche) in 2 mL for 1 hour at 37°C. Single cell suspension using 40μm cell strainers was prepared; erythrocytes were lysed with PharmLyse (BD Biosciences) (15 (link)). Cells were incubated with anti-mouse CD16/32 mAb and stained with directly-labeled antibodies against CD45, CD11b, F4/80, Ly6G, Ly6C and CD31 (BD Biosciences). Blood samples were treated with PharmLyse and stained as described above. Data were acquired on a FACS Canto II (BD Biosciences) and analyzed using Flow Jo software (Tree Star).
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2

Isolation of Lung Endothelial Cells and Inflammatory Monocytes

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PBS-perfused lungs were minced and digested in Collagenase D and A (1 mg/mL each, Roche) for 1 hour at 37°C. A single-cell suspension was prepared by passing the digested lungs through 40μm cell strainers (BD Biosciences). Cells were incubated with antibodies against CD31, CD45, CD11b, Ly6C and Ly6G (eBiosciences). Endothelial cells (CD45-CD11b-CD31+) and inflammatory monocytes (CD45+CD11b+Ly6ChighLy6G-) were sorted with a FACSAria III sorter (BD Biosciences). Total RNA was isolated using the RNeasy Mini Kit (Qiagen).
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3

Profiling Tumor-Associated Immune Cells

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The lungs of 4T1-tumor bearing mice were perfused, minced and digested in Collagenase D and A (2 mg each, Roche) for 1 hour at 37°C. A single-cell suspension using 40μm cell strainers was prepared, erythrocytes lysed. Cells were resuspended in staining buffer with Fc block (eBioscience), incubated on ice for 10 min, followed by staining with following antibodies: CD45-PB, CD11b-BV510, CD64-PE, Ly6C-APC, Ly6G-PerCP-Cy5.5 (all from BD) for 30 min. Data were collected with CountBright absolute counting beads (Life Technologies) using a FACSCanto (BD) and analyzed by FlowJo software (FlowJo, LCC).
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