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4 protocols using rabbit polyclonal anti caspase 3 antibody

1

Apoptosis Assay with Annexin V, PI, and Caspase-3

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Propidium iodide (PI), 7-aminoactinomycin D (7-AAD), Annexin V Apoptosis Detection Kit APC and isotype-matched negative control antibody were from Ebioscience (Paris, France). The Pan Caspase Inhibitor Z-VAD-FMK (1/1000) was from R and D system (Minneapolis, MN, USA). N-acetyl-L-cysteine (NAC), were purchased form Sigma Aldrich, St Louis, MO, USA). Rabbit anti human antibody specific for the cleaved (active) form of caspase-3, 3,3'-Dihexyloxacarbocyanine Iodide DiOC 6(3), Dylight 647 goat anti-rabbit IgG, Hoechst 33342, Accutase, penicillin, streptomycin, phosphate buffer saline, α and D Minimum Essential Medium (MEM) Glutamax, fetal calf serum and goat serum, were from Invitrogen (Carlsbad, CA, USA). Rabbit polyclonal anti-caspase-3 antibody was from Cell Signaling Technology (Danvers, MA, USA).
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2

Immunohistochemical Staining of MPO and Caspase-3 in Lung Tissue

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Immunohistochemical staining to identify MPO and caspase-3 was performed as previously described in [16 (link)]. In brief, formalin-fixed paraffin lung tissue sections were de-paraffinized and pretreated for antigen retrieval. The endogenous peroxidase was quenched using 3% H2O2 and 100% methanol for 15 min. The lung sections were immunostained with the rabbit polyclonal antibody to MPO (1:100, Cell Signaling Technology) and rabbit polyclonal anti-caspase-3 antibody (1:200; Cell Signaling Technology). The slides were then incubated with rat-specific horseradish peroxidase-conjugated secondary antibody (Nichirei Corporation, Tokyo, Japan) for 30 min after being washed twice with phosphate-buffered saline (PBS). The horseradish peroxidase was visualized after a chromogenic reaction with diaminobenzidine for 3 min, and the lung tissue sections were counterstained with hematoxylin.
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3

Protein Expression Analysis by Western Blot

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Proteins (30μg) were separated by SDS-PAGE and transferred to nitrocellulose membranes. Nonspecific binding was blocked in 5% nonfat milk in Tris-buffered saline (TBS) + 0.1% Tween-20 for 1 h. The membranes were probed overnight with primary antibodies for rabbit anti-Mfn2 (Abcam, Cambridge, MA), rabbit polyclonal anti-Bcl-2 antibody (Cell Signaling, USA), rabbit polyclonal anti-Bax antibody (Cell Signaling, USA), rabbit polyclonal anti-caspase3 antibody (Cell Signaling, USA), rabbit polyclonal anti-caspase9 antibody (Cell Signaling, USA), rabbit polyclonal anti-MMP-2 antibody (Cell Signaling, USA), rabbit polyclonal anti-MMP-9 antibody (Cell Signaling, USA), rabbit polyclonal anti- integrin β1 antibody (Cell Signaling, USA) and rabbit polyclonal anti-β-actin antibody (Santa Cruz Biotech, CA) in TBS-T containing 1% nonfat milk at 4°C, washed three times with TBS-T for 10 min, and were probed with horseradish peroxidase-conjugated secondary antibodies for 1 h. The membranes were washed three times and exposed in a standard enhanced chemiluminescence reaction according to manufacturer’s instructions (Pierce, Rockford, IL.). The results were normalized to β-actin signal intensity.
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4

Caspase-3 and NF-kB Expression

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Bilateral Frontal cortices anterior to the bregma were dissected at 5 days after ROSC, and the left cortical tissues were homogenized for western blotting. Total protein lysates were prepared using lysis buffer (Thermo Scientific, Rockford, IL, USA) containing protease inhibitors cocktail (Sigma-Aldrich) and phosSTOP phosphatase Inhibitor Cocktail (Roche, Nutley, NJ, USA). The BCA assay kit (Thermo Fisher Scientific, USA) was used to measure the protein concentration. Samples comprising 20 μg total protein per lane was separated by SDS-PAGE and then transferred to a PVDF membrane. The membranes were blocked with 5% non-fat milk for about 1 h at room temperature and incubated with the following primary antibodies overnight at 4 °C: rabbitpolyclonal anti-caspase-3 antibody (1:1000; Cell Signaling Technology, USA); rabbit polyclonal anti-NF-κB antibody (1:1000Protein-tech, China);α-tubulin (1:5000; Protein-tech, China,). After incubation with secondary antibodies, the immunoreactive bands were developed using enhanced chemiluminescence reagents (Pierce, IL, USA) and was visualized using GeneSnap software version 7.08. The protein amounts were quantified using Image J software and normalized to the density of α-tubulin in the same sample. The results of rats from the different experimental groups were then normalized to the mean values of the corresponding control animals.
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