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M13 mp18 phage genome

Manufactured by New England Biolabs
Sourced in United States

M13 mp18 phage genome is a circular, single-stranded DNA molecule used as a cloning vector in molecular biology. It serves as a template for the production of single-stranded DNA, which is commonly used in various DNA sequencing and site-directed mutagenesis applications.

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2 protocols using m13 mp18 phage genome

1

Origami Reaction Self-Assembly Protocol

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The thermal condition for self-assembly in origami reaction was set using C1000 thermal cycler (Bio-Rad, California, USA). Transmission electron microscopy was done using Philips EM028 TEM, Aachen, Germany. The micrographs were obtained by JPK-AFM (JPK Instruments AG, Berlin, Germany). Mica was prepared from Nanotechnology Systems Corporation, Tehran, Iran. M13 mp18 phage genome and T4 DNA ligase were purchased from New England Biolabs (Massachusetts, USA). Desired single-stranded oligonucleotides were synthesized and desalted by Sigma–Aldrich Chemie GmbH (Munich, Germany). Quantum Prep Freeze ‘N Squeeze DNA gel-extraction spin columns were from Bio-Rad. SYBR Gold nucleic-acid gel stain was purchased from Molecular Probes Inc. (Eugene, Oregon, USA). GeneRuler DNA Ladder Mix was from Thermo Fisher Scientific, Inc. (Waltham, MA, USA).
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2

Insulin Aptamer Synthesis and Characterization

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BIO-RP-purified DNA oligonucleotides (such as biotin-5′ GGTGGTGGGGGGGGTTGGTAGGGTGTCTTC3′, as a biotin-labelled G-quadruplex insulin aptamer [27 (link)], and DNT staples) were synthesized by Bioneer, Korea. In addition, to rule out non-specific insulin binding, a control 30 mer DNA oligonucleotide was synthesized by Bioneer with a random sequence (biotin-5' NNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3′). M13mp18phage genome and T4 DNA ligase were purchased from New England Biolabs (Massachusetts, USA). Quantum Prep Freeze ‘N Squeeze DNA gel-extraction spin columns were obtained from Bio-Rad. Streptavidin (fluidMAG-Streptavidin) magnetic nanoparticles of 100 nm diameter size and a Magneto PURE-Micro separator were purchased from Chemicell (Germany). 3, 3′, 5, 5′ tetramethylbenzidine (TMB), hemin (Bioextra, from porcine), insulin and stop reagent for the TMB substrate were provided from Sigma, USA. Hemin stock solution (5 mM) was prepared in dimethyl sulfoxide (DMSO) (purchased from Bio Idea Company, Tehran, Iran), stored in the dark at – 20°C and diluted to the required concentration with buffer solution (20 mM Tris-HCl, 40 mM KCl, 200 mM NaCl, 0.06%(v/v) Triton X-100, pH 7.4). The desired concentration of insulin was dissolved in binding buffer (20 mM Tris-HCl, 140 mM NaCl, 5 mM KCl, 1 mM CaCl2 and 1 mM MgCl2, pH 7.4). The insulin ELISA kit was purchased from Demeditec, Germany.
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