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4 protocols using cd8 brilliant violet 570

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Multiparametric Flow Cytometry of Immune Cells

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Whole blood, whole bone marrow, and single cells from lymph nodes, colon biopsies, and rectum biopsies were first stained immediately with LIVE/DEAD Fixable Aqua Dead Cell Stain (ThermoFisher). Cells were then stained using the following surface antigen antibodies with clone denoted in (), from BD biosciences unless otherwise stated: CD45 PerCP (D058-1283), CD3 PE CF594 (SP34-2), CD20 PE Cy5 (2H7), CD4 Brilliant Violet 605 (Biolegend, OKT4), CD8 Brilliant Violet 570 (Biolegend, RPA-T8), CD14 Brilliant Violet 786 (Biolegend, M5E2), HLA-DR Brilliant Violet 711 (G46-6), and CD11b APC-H7 (ICRF44). Red blood cells were lysed in whole blood samples using FACs lysing solution (BD). T cells were defined as live/CD45+/CD20−/CD14−/CD3+ and CD4+ and CD8+ T cells were further delineated to assess activation by HLA-DR expression. Neutrophils were defined as live/CD45+/CD3−/CD20−/CD14+/CD11b+/HLA-DR−/HighSSC cells (Figure 7).
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2

Multiparametric Analysis of Activated CD8+ T Cells

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Experimentally infected monocytes were coincubated with CD8+ T cells from the same, seropositive donor overnight in the presence of CD107a Alexa Fluor 647, 5 μg/ml brefeldin A, and 2 μM monensin (all from BioLegend) at 37°C. CD8+ T cells were harvested and washed and then stained with a combination of surface antibodies (CD3 brilliant violet 650, CD14 brilliant violet 510, and CD19 brilliant violet 510; BioLegend) and LIVE/DEAD Fixable Aqua Dead cell stain (Invitrogen) at 4°C. Cells were fixed and permeabilized using FIX & PERM (ADG, Kaumberg, Austria) and stained intracellularly with antibodies (CD69 Pacific Blue, 4-1BB phycoerythrin [PE]-Cy5, CD8 brilliant violet 570, and granzyme A FITC [BioLegend]; granzyme B FITC [Miltenyi Biotec, Inc.]; granzyme K FITC [Santa Cruz Biotechnology, TX, USA]; TNF-α brilliant ultraviolet 395 and IFN-γ brilliant violet 786). Responding CD8+ T cell populations were identified by the expression of CD69 and 4-1BB at levels above the background, and expression levels of CD107a, TNF-α, and IFN-γ were then measured. In all cases, cell doublets, monocytes, B cells, and dead cells were eliminated from the analyzed populations.
To analyze differentiation markers, monocytes were labeled with anti-CD14 and anti-CD83 antibodies (BioLegend) (both allophycocyanin [APC] conjugated).
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3

Multiparametric Flow Cytometry of Immune Cells

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Whole blood, whole bone marrow, and single cells from lymph nodes, colon biopsies, and rectum biopsies were first stained immediately with LIVE/DEAD Fixable Aqua Dead Cell Stain (ThermoFisher). Cells were then stained using the following surface antigen antibodies with clone denoted in (), from BD biosciences unless otherwise stated: CD45 PerCP (D058-1283), CD3 PE CF594 (SP34-2), CD20 PE Cy5 (2H7), CD4 Brilliant Violet 605 (Biolegend, OKT4), CD8 Brilliant Violet 570 (Biolegend, RPA-T8), CD14 Brilliant Violet 786 (Biolegend, M5E2), HLA-DR Brilliant Violet 711 (G46-6), and CD11b APC-H7 (ICRF44). Red blood cells were lysed in whole blood samples using FACs lysing solution (BD). T cells were defined as live/CD45+/CD20−/CD14−/CD3+ and CD4+ and CD8+ T cells were further delineated to assess activation by HLA-DR expression. Neutrophils were defined as live/CD45+/CD3−/CD20−/CD14+/CD11b+/HLA-DR−/HighSSC cells (Figure 7).
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4

CD4+ T Cell and Monocyte Purity Analysis

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Isolated CD4+ T cell and monocyte purities were analyzed as previously described (33 (link)). In brief, the purities of cells from the spleen, lung, and PBMCs were assessed by comparing preselection suspensions, postselection CD11b+ cells, and postselection flowthrough. Samples were stained in 100 μl PBS–2% fetal bovine serum with mouse anti-human CD3-phycoerythrin (PE) (clone SP34-2; BD Biosciences, San Jose, CA), CD11b-fluorescein isothiocyanate (Beckman Coulter, USA), or CD4-Brilliant Violet 650 (clone OKT4; BioLegend, San Diego, CA) and LIVE/DEAD Aqua stain (Invitrogen). Whole blood was stained with CD3-PE (clone SP34-2; BD Biosciences, San Jose, CA), CD4-Brilliant Violet 650 (clone OKT4; BioLegend, San Diego, CA), and CD8-Brilliant Violet 570 (clone RPA-T8 BioLegend, San Diego, CA). Samples were incubated for 20 min at room temperature and fixed for 10 min with BD fluorescence-activated cell sorting lysing solution (BD Biosciences, San Jose, CA). Samples were acquired using a BD LSRFortessa flow cytometer (BD Biosciences). All data were analyzed using FlowJo software (FlowJo, Ashland, OR). The percentage of total CD3+ CD4+ CD8 cells in whole blood was used to calculate CD3+ T cell contamination in monocyte/Mϕ cultures of the Mϕ QVOA (Table 3).
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