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BRAF V600E is a genetic mutation assay that detects the BRAF V600E mutation in the BRAF gene. This mutation is commonly found in various types of cancer, including melanoma, thyroid cancer, and colorectal cancer. The assay is used to identify the presence of this specific mutation, which can provide valuable information for clinical decision-making and targeted therapy selection.

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3 protocols using braf v600e

1

Establishing Melanoma and Endothelial Cell Lines

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The human melanoma cell line A375 (MITF wild type, BRAF V600E, NRAS wild type) was obtained from American Type Culture Collection (Manassas, VA) and was grown in Dulbecco’s modified Eagle’smedium (DMEM, Euroclone, Milano, Italy) containing 2 mM glutamine, 100 UI/ml penicillin, 100 μg/ml streptomycin and 10% FBS (Euroclone, Milano, Italy). A375–M6 melanoma cells (M6) were isolated from lung metastasis of SCID bg/bg mice i.v. injected with A375 cells and grown in the same conditions of A375. A375 and M6 were independently validated by STR profiling by the DNA diagnostic centre BMR Genomics (Padova, Italy). Cells were amplified, stocked, thawed and were kept in culture for a maximum of 4 months. ECFCs were isolated from > 50 ml human umbilical cord blood (UCB) of healthy newborns as described previously [24 (link)], were selected as CD45, CD34+, CD31+, CD105+, ULEX+, vWF+, KDR+ cells [24 (link)] and were grown in EGM-2 culture medium (Lonza), supplemented with 10% FBS. Human Microvascular Endothelial Cells (HMVECs) were purchased from Lonza and were grown in the same conditions of ECFCs.
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2

BRAF-Mutant Melanoma Cell Culture

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The human melanoma cell lines A-375 and SK-MEL-28, carrying BRAFv600e mutation, were obtained from the American Type Culture Collection (ATCC, Manassas VA). The cultures were grown in Dulbecco’s Modified Eagle’s Medium (DMEM) containing 4 mM l-glutamine; 4500 mg/L glucose; 1 mM sodium pyruvate and 1500 mg/L sodium bicarbonate, in the presence of 10% FBS; and 1% penicillin–streptomycin. To ensure the quality and integrity of human cell lines, cells from the initial thawed vials were used for up to a maximum of 10 passages in all the experiments, as recommended by the supplier. Cells were tested for the presence of mycoplasma (EZ-PCR Mycoplasma Test Kit; Biological Industries, Beth Haemek, Israel) with negative results.
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3

Melanoma Cell Lines for MAPK and HDAC Inhibition

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Human melanoma cell lines used for this study included BRAF-mutant (BRAFV600E) A2058 and BRAF wild-type (BRAFWT) MEWO cells obtained from American Type Culture Collection, and they were used within 15 passages for all experiments. A2058 cells were maintained in Dulbecco’s modified Eagle’s medium (DMEM) with 10% fetal bovine serum (FBS), 100 units mL−1 penicillin, and 100 units mL−1 streptomycin. MEWO cells were cultured in DMEM/F-12 1:1 media supplemented with 10% FBS, 100 units mL−1 penicillin, and 100 units mL−1 streptomycin. All cells were grown at 37 °C in a humidified atmosphere (5% CO2). Drugs used in this study were purchased commercially, including BRAFi dabrafenib and vemurafenib (Selleckchem) for MAPK inhibition and HDACi vorinostat (Selleckchem) and 4-phenylbutyrate (Sigma-Aldrich). 203Pb chloride was obtained from Lantheus Medical Imaging (North Billerica, MA). 224Ra/212Pb generator was provided by Oak Ridge National Laboratory (Oak Ridge, TN). Pb-specific resin was obtained from Eichrom Technologies (Lisle, IL).
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