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28 protocols using lipopolysaccharide lps from escherichia coli

1

Flavonoid Compounds Characterization and Analysis

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3-Hydroxyflavone, 6-hydroxyflavone, 7-hydroxyflavone, 6-methoxyflavon, diadzein and resveratrol were obtained from Sigma-Aldrich, USA with a purity of >98%. Di-hydroxylated and polyhydroxylated flavones were obtained from Indofine Chemical Co. (Hillsborough, NJ, USA) with a purity of >98%. Lipopolysaccharide (LPS) from Escherichia coli was obtained from Sigma-Aldrich, USA. All other chemicals were obtained from Sinopharm Chemical Reagent Co., Ltd (Shanghai, China) or Sigma Aldrich, USA unless otherwise specified. Stock solutions of all flavonoid compounds were prepared in DMSO. All of the experiments were independently repeated at least three times. NMR spectra were recorded with Bruker Avance-400 NMR spectrometer (Madison, WI, USA). Electrospray ionization mass spectroscopy (ESI-MS) analysis was carried out with a Thermo Fisher TSQ Quantum Max Triple Stage Quadrupole mass spectrometer (MA, USA).
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2

Inflammatory Response Quantification

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ATP, oxidized ATP, Brilliant Blue G (BBG), PI, LY, Triton X‐100, HEPES, NaCl, KCl, MgCl2, CaCl2, phosphate‐buffered saline, modified Griess reagent, Lipopolysaccharide (LPS) from Escherichia coli, dihydroethidium (DHE), and RPMI 1640 were purchased from Sigma Chemical Co. (St. Louis, MO, USA). Fetal bovine serum was obtained from Gibco (Massachusetts, MA,USA). The ELISA Kit for detection of human and murine IL‐1β was purchased from R&D Systems (Minneapolis, MN, USA). A kit for the detection of lactate dehydrogenase (LDH) was purchased from Doles (Goiania, GO, Brazil).
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3

Neutrophil ROS Production by Zymosan and LPS

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Reactive oxygen species (ROS) production by neutrophils was measured after activation with zymosan A (Zym) from Saccharomyces cerevisiae (Sigma-Aldrich, St. Louis, MO, USA) and with lipopolysaccharide (LPS) from Escherichia coli (Sigma-Aldrich, St. Louis, MO, USA). An amount of 50 μL of fresh neutrophils in suspension (6 × 105 cells) was introduced in a 96-well microplate containing 50 μL of Zym or LPS prepared in 2 mM in PBS, pH 7.4. Then, an indicator, was added into all wells: cell-permeant probe 2,7-dichlorofluorescein-diacetate (DCFH-DA, 61.6 μM in Hanks’ Balanced Salts Medium). The fluorescence (Ex, 480 nm; Em, 530 nm) was registered in an FLx800 Microplate Fluorescence Reader (Biotek Instruments, Inc., Winuschi, VT, USA) at 37 °C for 1 h.
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4

Apoptosis Assay in Mouse Cells

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CL429 (Cat. Code: vac‐c429) was purchased from InvivoGen. Lipopolysaccharide (LPS) from Escherichia coli was purchased from Sigma (St.Louis, MO, USA), and Pam3CSK4 was obtained from EMC Microcollection (Tübingen, Germany). The TransDetect Annexin V‐FITC/PI Cell Apoptosis Detection Kit was purchased from TransGen Biotech (Beijing, China). RPMI 1640 and foetal bovine serum (FBS) were supplied by Gibco. Streptavidin FITC, anti–Mouse CD117 APC eFluor 780, and anti‐Mouse Ly‐6A/E (Sca‐1) PerCP‐Cyanine5.5 were purchased from BD Pharmingen (San Diego, CA). Lineage Cell Detection Cocktail‐Biotin was purchased from Miltenyi Biotec (Germany). Lipofectamine 3000 was purchased from Thermo Fisher. Antibodies were purchased from Affinity Biosciences (Jiangsu, China) and Cell Signaling Technology (Massachusetts, USA). Commercial ELISA kits were purchased from DAKEWE (Beijing, China).
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5

Ethanol Extraction of EA Leaves

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The EA was collected in Asan, South Korea, in November 2020, and the plants were air-dried and stored at −20°C before use. Two types of ethanol extracts, EA leaf extracts 1 and 2, were prepared. The dried leaves of EA (2 kg) were extracted with 70% ethanol (2 × 20 L) for 4 h (two times) at 80°C. The extract was filtered through a filter paper. The solvent was evaporated under reduced pressure to yield the concentrated leaf extract 1 (174.0 g). Next, leaf ethanol extract 1 (9.0 g) was suspended in 70% ethanol and fractionated with hexane (four times). A portion of 70% ethanol was evaporated under reduced pressure to yield the concentrated leaf extract 2 (6.7 g). Chlorophyll-free leaf extract 2 was used for in vitro and in vivo studies. Lipopolysaccharide (LPS) from Escherichia coli and Cy or HemoHIM were purchased from Sigma-Aldrich (St. Louis, MO, USA) and Kolmar BNH Co., Ltd. (Sejong, Korea), respectively.
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6

Immune Stimulating Compounds Protocol

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Tissue culture media and media supplements, mannan (Saccharomyces cerevisiae), laminarin (Laminaria digitata), Tris(2-carboxyethyl)phosphine hydrochloride (TCEP), f-MLF (N-Formyl-methionyl-leucyl-phenylalanine), epicatechin, polyinosinic:polycytidylic acid, sodium salt (poly (I:C)), lipopolysaccharide (LPS) from Escherichia coli, TNF-alpha, and GM-CSF were obtained from Sigma-Aldrich (St. Louis, USA). 4-(N-Maleimidomethyl) cyclo-hexanecarboxylic-acid N-hydroxysuccinimide ester (SMCC) was provided by Thermo Scientific (Erembodegem, Belgium). Biocompatible Anchor for cell Membrane (BAM, Mw 4000) was obtained from NOF EUROPE (Grobbendonk, Belgium). N-Formyl-methionyl-leucyl-phenylalanine with two lysine molecules (f-MLFKK) was synthesized by Schafer-N (Copenhagen, Denmark). Imiquimod (R-837) was delivered by Merck Millipore (Billerica, USA), monophosphoryl lipid A (MPLA) by Avanti Polar Lipids (Alabaster, USA), and resiquimod (R-848) by Tocris Bioscience (Bristol, UK).
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7

Insulin Modulates THP-1 Cell Response to LPS

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A human monocyte/macrophage cell line, THP‐1 cells, was purchased from American Type Culture Collection (Manassas, VA, USA). After the THP‐1 cells were starved without serum for 24 h, human insulin (Sigma‐Aldrich) was added at the concentration of 10 or 100 nmol/L 30 min before lipopolysaccharide (LPS) from Escherichia coli (Sigma‐Aldrich) stimulation. LPS (100 ng/mL) was added and cells were collected 4 h later for total RNA extraction using RNeasy (Qiagen, Valencia, CA, USA).
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8

Microglial BV-2 Cells Activation Assay

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Microglial BV‐2 cells were cultured in Dulbecco's modified Eagle's medium (DMEM) supplemented with 2mM Glutamax, 10% fetal bovine serum (FBS), 100‐units/mL penicillin, and 100‐μg/mL streptomycin (Life Technologies, Carlsbad, CA, USA). Prior to treatment, the cells (80% density) were left overnight in reduced FBS (2%) media. The following morning, the cells were treated with 10‐ng/mL lipopolysaccharide (LPS) from Escherichia coli (Sigma‐Aldrich, St. Louis, MO, USA) or PBS vehicle control in reduced FBS (2%) media. Cells were collected for simultaneous RNA isolation and protein extraction at the indicated hours after treatment.
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9

NOSH-SUL (AVT-18A) Synthesis and Evaluation

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NOSH-SUL (AVT-18A), (Z)-4-(3-thioxo-3H-1,2-dithiol-5-yl) phenyl 5-(2-(5-fluoro-2-methyl-1-(4-(methylsulfinyl) benzylidene)-1H-inden-3-yl) acetoxy)-2-((4-(nitrooxy) butanoyl)oxy) benzoate was synthesized as described previously [29] and was a gift from Avicenna Pharmaceuticals Inc, (New York, NY). The structural components of the NOSH-SUL are shown in Fig. 1. Lipopolysaccharide (LPS) from Escherichia coli, SUL, and carrageenan were purchased from Sigma (St. Louis, MO, USA). Kits used for determination of PGE2, lipid peroxidation, and superoxide dismutase, were from Cayman Chemical (Ann Arbor, MI).
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10

Generating Murine Dendritic Cells

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C57BL6 BM-derived immature DCs (imDCs) were generated as described previously [16 (link), 17 (link), 29 (link)]. Briefly, BM was harvested from the femurs and tibiae of mice and cultured in RPMI-1640 medium (Gibco-BRL) supplemented with 10% (v/v) FBS (Gibco-BRL) and 1% (w/v) PS in the presence of 20 ng/mL recombinant murine (rm) GM-CSF (R&D Systems, Minneapolis, MN, USA) and 10 ng/mL rmIL-4 (R&D Systems). On culture days 2 and 4, half of the medium was removed and replaced with fresh media containing cytokines. On day 6, imDCs were purified via positive selection with CD11c+-magnetic beads (Miltenyi Biotec Inc., Auburn, CA, USA). Then, mature DCs (mDCs) were generated by further cultivation for 48 h of CD11c+ DCs with 1 μg/mL lipopolysaccharide (LPS) from Escherichia coli (Sigma-Aldrich) and 10 ng/mL rmGM-CSF.
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