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3 protocols using anti cd38 percp cy5.5

1

Comprehensive flow cytometry protocol

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FACS staining was external unless otherwise specified. Cells were stained for LIVE/DEAD® Fixable Near-IR Dead Cell Stain Kit, for 633 or 635 nm Excitation (Invitrogen, UK). Internal staining: cells were fixed with 2% formaldehyde (Sigma Aldrich, UK) and permeabilized with IX permeabilization buffer (eBioscience, UK). The following antibodies were used for flow cytometric analysis: anti-CD4-PerCp-Cy5.5 (RPA-T4), anti-CD19-PB (HIB19), anti-CD38-PerCP-Cy5.5 (HIT2), anti-IgD-FITC (IA6-2), anti-CXCR5-PB (J252D4), anti-CD27-PE-Cy7 (M-T271), anti-CD34-FITC (561), anti-CD68-APC (Y1/82A), anti-CD83-BV421 (HB15e), anti-ICOS-APC (C398.4A) (Biolegend, UK), anti-CD20-PO (HI47, Life technologies, UK), anti-CD138-APC (B-A38, Beckman Coulter, UK), anti-CD10-PE-Cy7 (HI10a), anti-CD45-RA-FITC (T6D11), anti-CD161-PE (191B8), anti-IgM-APC (PJ2-22H3), anti-CXCR4-APC (12G5, Milteny Biotec, UK), anti-CD3-FITC (ICHT1, R&D Systems, UK), anti-LLT1-PE (402659 R&D), anti-IgG isotype control-PE, IgG1 and IG2A isotype controls (R&D Systems, UK), anti-mouse IgG-PE (R&D Systems, UK).
Novel mouse anti-human CLEC2D (LLT1) monoclonal antibodies were generated, clones 359.7G7, mIgG1 and 359.2H7, mIgG2al. All purified antibodies are dialyzed against PBS, are low in endotoxin (< 2EU/mg), and are filtered sterile.
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2

Phenotyping H7N9 Influenza-Specific CD8+ T Cells

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PBMCs from H7N9 patients were stained with A2-M158 tetramer conjugated to PE (1:200) in FACS buffer (PBS with 1% bovine serum albumin). Cells were stained with antibodies: anti-CD3-PB (BD Cat #558117, UCTH1, 1:200), anti-CD8-FITC (BD Cat #347313, SK1, 1:50), anti-CD27-PE-Cy7 (eBioscience Cat #25-0279-42, O323, 1:25), anti-CD45RA-APC-Cy7 (BD Cat #560674, HI100, 1:50), anti-HLA-DR-ECD (Beckman Coulter Cat#IM3636, Immu-357, 1:25), anti-CD38-PerCPCy5.5 (Biolegend, Cat#303522, HIT2; 1:50), anti-PD-1-APC (Biolegend #329908, EH12.2H7, 1:25), and Live/Dead-aqua 525 (Invitrogen, 1:800). Lymphocytes were washed, acquired on a FACSAria II sorter with FACS Diva software (Becton Dickinson) and analyzed with FlowJo software (Treestar).
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3

Comprehensive Immunophenotyping of Immune Cells

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Anti-CD19 APC-Cy7, anti-CD38 PerCp-Cy5.5, anti-CD4 PE-Cy7, anti-CD25 PerCP-Cy5.5, anti-CD86 APC, anti-CD80 BV421, anti-CD45RA BV605, anti-ICOS PE, anti-CD21 PE-Cy7, anti-CD80 BV421, anti-CD27 PerCp-Cy5.5, anti-PD-1 APC, anti-CD45RA APC-Cy7, anti-HLA-DR BV605, anti-CD11c AF700, anti-CD86 BV711, anti-CD95 BV650, anti-IgD BV786, anti-FCRL5 APC, anti-CXCR3 BV421, anti-CCR6 BV605, anti-CD19 BV650, anti-CD19 BV605, anti-PD-L1 BV421, anti-PD-L2 PE, anti-ICOS-L PE, anti-OX40L PE, anti-IL-10 PE, anti-IL-10 APC, anti-TNF-α APC-Cy7 (all obtained from BioLegend); anti-IgD FITC and anti-IgD PE (both from Southern Biotech); anti-CD27 PE (Dako); and anti-CD21 PE-Cy7, anti-CD69 FITC, anti-HLA-DR FITC, anti-CD27 BV605, anti-CD40 FITC, anti-CD40L PE, anti-ICAM-1 PE, anti-CXCR5 BUV395 and anti-CD27 BUV395 (all from BD Biosciences).
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