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Pdc 001

Manufactured by Harrick
Sourced in United States

The PDC-001 is a laboratory instrument designed for the determination of plasma droplet characteristics. It measures parameters such as droplet size, velocity, and number density. The device operates based on the principle of laser diffraction and provides detailed information about the properties of liquid dispersions.

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48 protocols using pdc 001

1

Compartmentalized Coculture in 2D Microfluidics

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For the compartmentalised coculture in 2D, Xona microfluidics commercial devices with microchannels of 900 μm (length), 10 µm (width), 5 µm (height) and spaced 50 µm apart (Xonamicrofluidics, #SND900, US) were utilised.
To prepare the devices, a 2 mm perforation was made in the SN seeding side with a punch (Miltex Instruments, #33-31, US), and a 3 mm perforation in the SkM seeding side with another punch (Miltex Instruments, #33-32, US), as shown in Fig. 2B for chambers c1 and c2, respectively. Then, the glasses (Fisher scientific, #12-542-C, US) and the Xona polydimethylsiloxane (PDMS) devices were cleaned sonicating in 100% ethanol for 15 min, drying with a nitrogen gas stream and dehydrating in a drying oven at 60 °C for at least 30 min (Binder, #FD-23). Finally, glass coverslips were permanently bonded to the PDMS pieces exposing both to 1 min under high frequency oxygen plasma (Harrick plasma, #PDC-001) at 700 mTorr, then putting both pieces together and sealing them with at least 30 min dehydration in the oven at 60 °C. At this point, devices could be stored for the beginning of the experiment.
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2

Fabrication of Nanofiber-Hydrogel Composite

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NHC was made following the protocol previously described [22 (link)]. Briefly, nanofibers were electrospun from a PCL solution (16% w/w; Sigma-Aldrich, St. Louis, MO, USA) in a mixture of dichloromethane (Sigma-Aldrich) and dimethylformamide (9/1, v/v; Sigma-Aldrich). Poly(9,9-dioctylfluorene-alt-benzothiadiazole) (F8BT; Sigma-Aldrich), a green fluorescent dye, was added to the PCL solution to enable fiber identification after injection [22 (link)]. Carboxyl groups were introduced to the surface of the fibers in a plasma cleaner (expanded plasma cleaner; PDC-001; Harrick Plasma; Ithaca, NY, USA). These carboxyl groups were initiated by ethyl dimethylaminopropyl carbodiimide (Sigma-Aldrich) and N-hydroxysuccinimide (Sigma-Aldrich) and then converted to maleimide (MAL) groups by N-(2-aminoethyl) maleimide (Sigma-Aldrich). The MAL-modified fibers were cryogenically milled, sterilized with 70% ethanol. All three components of NHC were stored individually at −20 °C, and thawed 30 min prior to use. NHC was prepared by mixing MAL-modified fibers (10 mg/mL) into a mix of HA-SH (4 mg/mL; ESI BIO, Alameda, CA) and PEGDA (2 mg/mL; ESI BIO) in sterile phosphate-buffered saline (PBS) [22 (link),25 (link)] on ice. We mixed and injected NHC or MSC-NHC within 15 min after exposing the contused spinal cord (see below Section 2.4). Once mixed, NHC can be kept on ice for 6 h for injections.
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3

Microfluidic Device Fabrication Protocol

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The microfluidic device was fabricated using the same protocol as described in our previous study (Son et al., 2021 (link)). For the thin PDMS layer with fluid layer features, ~10 g of mixture was poured on the fluid mold (pretreated with chlorotrimethylsilane) and was spun at 2,300 RPM to generate ~ 50 μm height PDMS layer. After curing, this thin layer was aligned with the thick PDMS slab that has control features using a custom stereomicroscope with a XYZ translation stage. After punching holes and cleaning, the PDMS layers were bonded to a large glass substrate (127.8 × 85.5 × 1 mm, Marienfeld). All layers and substrates were bonded using oxygen plasma (Harrick, PDC-001).
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4

Cell and Tissue Substrate Functionalization

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For cell culture experiment, the coverslips were cleaned with a plasma cleaner at HIGH (PDC-001, Harrick Plasma) for 5 minutes followed by the immersion in 1% bind-silane solution (GE; 17-1330-01) made in pH3.5 10% (v/v) acidic ethanol solution for 30 minutes at room temperature. Then the coverslips were rinsed with 100% ethanol 3 times, and heat-dry in an oven for > 90°C for 30 minutes. Next, the coverslips were treated with 100 μg/uL of Poly-D-lysine (P6407; Sigma) in water for >1 hour at room temperature. Followed by 3 times rinsing with water, the coverslips were air-dried and kept at 4°C for no longer than 2 weeks. For mouse brain slices experiment, the coverslips were cleaned by 1M HCl at room temperature for 1 hour, rinsed with water once, and followed by 1M NaOH solution treatment at room temperature for 1 hour. Then, the coverslips were rinsed three times with water, before immersion in 1% bind-silane solution for 1 hour at room temperature. The remaining steps are the same as the coverslip functionalization for cell culture.
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5

Cell and Tissue Substrate Functionalization

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For cell culture experiment, the coverslips were cleaned with a plasma cleaner at HIGH (PDC-001, Harrick Plasma) for 5 minutes followed by the immersion in 1% bind-silane solution (GE; 17-1330-01) made in pH3.5 10% (v/v) acidic ethanol solution for 30 minutes at room temperature. Then the coverslips were rinsed with 100% ethanol 3 times, and heat-dry in an oven for > 90°C for 30 minutes. Next, the coverslips were treated with 100 μg/uL of Poly-D-lysine (P6407; Sigma) in water for >1 hour at room temperature. Followed by 3 times rinsing with water, the coverslips were air-dried and kept at 4°C for no longer than 2 weeks. For mouse brain slices experiment, the coverslips were cleaned by 1M HCl at room temperature for 1 hour, rinsed with water once, and followed by 1M NaOH solution treatment at room temperature for 1 hour. Then, the coverslips were rinsed three times with water, before immersion in 1% bind-silane solution for 1 hour at room temperature. The remaining steps are the same as the coverslip functionalization for cell culture.
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6

Fabrication of SSAW-based Cell/Bead Washer

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Fig. 1(b) shows an optical image of our SSAW-based cell/bead washing device. To fabricate the device, we first deposited a double layer of chrome and gold (Cr/Au, 50 Å /500 Å) on a photoresist-patterned lithium niobate (LiNbO3) wafer (128° Y-cut, 500 μm thick, and double-side polished) using an e-beam evaporator (RC0021, Semicore, USA). Then we used a lift-off technique to expose the pair of IDTs with a period of 200 μm and width of 8 mm. The PDMS microchannel (1 mm wide in the main channel) with three inlets (650, 300, and 150 μm wide, respectively) and two outlets (300 μm wide) was fabricated by standard soft-lithography using SU-8 photoresist (channel height is 75 μm). A Harris Uni-Core 0.75 mm punch was used to drill holes for inlets and outlets. For device bonding, we first placed the PDMS microchannel and the LiNbO3 substrate in a plasma cleaner (PDC001, Harrick Plasma, USA) for 3 min. Immediately after plasma treatment, we aligned the PDMS microchannel with markers on the LiNbO3 substrate in between the IDTs and bonded with a 15° tilt angle between the microchannel and the IDTs. After bonding, we cured the whole device at 65 °C overnight before use.
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7

Phosphonic Acid Functionalization of Titanium Alloy

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Annealed Ti6Al4V substrates were cleaned in an air plasma cleaner (Harrick, PDC-001) for 2 min before being placed in a plastic dish, and submerged under 40 mL of 3-mM anhydrous methanol solution of PA-O-Br (prepared and purified as we previously reported40 (link)) at room temperature in dark for 24 h. All retrieved substrates (Ti-Br) were then annealed at 110 °C for 15 min in a vacuum oven to stabilize the bonding of the phosphonic acid group to the thin oxidized metal surface before being subjected to extensive sonication in methanol (10 min each time, twice) and vacuum drying.
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8

Fabrication of PDMS Nanoscale Mold

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Polydimethylsiloxane (PDMS) pre-polymer solution was first mixed with the cross-linker (Figure 2a), followed by the addition of hexane (Figure 2b). Assembled binary array was the nanocolloid-patterned substrate, which was plasma sputtered (Figure 2c) via a sputtering device (PDC-001, Harrick Plasma, Ithaca, NY, USA) and Argon gas. The sputtering time was 5 min. The soft mold was prepared by casting the PDMS pre-polymer mixture over the binary nanosphere array that acts as a template (Figure 2d). After being placed in a vacuum chamber for 5 min (Figure 2e), the PDMS mold was put in an isothermal oven at 60 °C for 3 h (Figure 2f). The soft mold was trimmed from the template post-curing (Figure 2g), and was placed in acetonitrile for ultrasonication for 30 min to eliminate remaining PS nanospheres on the mold (Figure 2h). A PDMS mold with nanocavities was thus obtained.
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9

Soft Lithography for Microfluidic Fabrication

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The microfluidic devices were fabricated using soft lithography39 . SU-8 3025 photoresist (MicroChem) was used to make a 24-μm-tall master mold structure on a 3-inch silicon wafer using standard photolithography techniques. PDMS prepolymer (Momentive, RTV 615) mixed with curing agent at 10:1 ratio was poured onto the master placed in a petri dish. After degassing under vacuum, the PDMS was cured at 65 °C for 1 hour and cut out. Holes were punched at inlet and outlet ports using a 0.75 mm biopsy punch (Harris, Uni-Core 0.75). After cleaning with scotch tape, the PDMS channel structure was bonded to a glass substrate by treating with oxygen plasma for 60 s at 1 mbar in a plasma cleaner (Harrick Plasma, PDC-001). The channel surface was treated with Aquapel to render it hydrophobic.
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10

Fabrication of PDMS Microfluidic Devices

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A silicon master wafer patterned with the microfluidic structures was fabricated by standard photolithography as reported previously,34 (link) followed by elastomer molding via soft lithography. Briefly, the PDMS silicon elastomer base and curing agent were mixed at a 10:1 ratio (w/w), poured onto the master wafer, degassed under vacuum, and cured in an oven for at least 4 h at 80 °C. The PDMS mold was then peeled off the master wafer, resulting in channels with a depth of 10 µm. Then, 2 mm diameter reservoirs were manually punched at the channel ends. The PDMS slab was cleaned in isopropanol and distilled water and a glass slide was cleaned in acetone, isopropanol, and distilled water in an ultrasonic bath and dried in a stream of nitrogen. The slide and PDMS slab were subsequently treated in an oxygen plasma (PDC-001; Harrick Plasma, Ithaca, New York, U.S.A.) at high RF for 1 min. After treatment, the PDMS mold was irreversibly bonded to the glass slide to form a sealed microchannel system.
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