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2 protocols using htra2 omi

1

Western Blot Analysis of Apoptosis Markers

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Whole cell lysis was carried out using Cell Lysis Buffer (Cell Signaling Technology, MA, USA) according to the manufacturer’s protocol, with the addition of Protease Inhibitor Cocktail (BioShop, Canada). Total protein was quantified with Pierce BCATM Protein Assay Kit (Thermo Fisher Scientific, MA, USA). Protein extract was separated on a polyacrylamide gel and transferred to a nitrocellulose filter (Bio-Rad, CA, USA) by wet-electroblotting. Subsequently, the immobilized proteins were incubated with the appropriate primary antibody: cytochrome c (#11940), Smac/Diablo (#2954), HtrA2/Omi (#9745) and β-Tubulin (#2128) (Cell Signaling Technology, MA, USA). Finally, the appropriate secondary antibody conjugated with horseradish peroxidase (#7074, Cell Signaling Technology, MA, USA) was applied. Detection was executed by chemiluminescence, using Clarity™ Western ECL Substrate (Bio-Rad, CA, USA). Western blot stripping buffer (Thermo Scientific, MA, USA) was used to remove the antibodies from the membrane.
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2

Protein Extraction and Western Blot Analysis

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Cells were harvested by washing with ice-cold lysis buffer (250 mM sucrose, 1.5 mM MgCl2, 10 mM KCl, 20 mM HEPES 7.6 pH, 1 mM of dithiothreitol, 1 mM phenylmethylsulfonyl fluoride, 50 mM NaF, 10 mM sodium orthovanadate, 20 mM sodium pyrophosphate, and protease inhibitors) for 15 min then supplemented with 5% of Nonidet P-40 for 2 min. Cytosolic fraction was collected from the supernatant after centrifugation at 14,000g for 10 min. Bradford reagent (Bio-Rad Laboratories Hercules, CA) was used to determine the protein concentrations, and equal amounts of samples loaded onto 10–15% SDS-polyacrylamide gels were separated by electrophoresis and transferred to PVDF membranes. Membranes were blocked and incubated with PAR-1 (Abcam, Cam- bridge, MA), cofilin, Caspase3, HtrA2/omi, or NF-κB (Cell Signaling Technology, Danvers, MA) primary antibodies at 4° C overnight. After washing, membranes were incubated for 1h at room temperature with a horseradish peroxidase-conjugated secondary antibody (1:5000; Jackson ImmunoResearch, West Grove, PA). Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) or beta-actin were used as loading controls, and band intensity was analyzed using Bio-Rad Chemi-Doc XRS Image Lab Software.
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