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3 protocols using 2 2 2 trichloroethanol

1

Trichloroethylene Cytotoxicity Assay Protocols

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Trichloroethylene (99.9 % purity) and hydrogen peroxide were obtained from Fisher Scientific (Waltham, MA, USA) while trichloroacetic acid (≥ 99.0% purity), 2,2,2-trichloroethanol (≥99% purity), forskolin (≥ 98.0% purity), mifepristone (RU486) (≥98% purity), hydroxyflutamide (OHF) (≥98% purity), and oxalic acid (≥99% purity) were purchased from Sigma-Aldrich (St. Louis, MO, USA). All test chemicals (Table S1) were diluted into dimethyl sulfoxide (DMSO) (≥99.7% purity) from Fisher Scientific (Waltham, MA, USA). Dihydrotestosterone (DHT) mimic, Cl-4AS-1, (>99% purity), 17β-estradiol (E2) (>99% purity), and tamoxifen (TAM) (≥99% purity) were acquired from Tocris Bioscience (Minneapolis, MN, USA). 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-tetrazolium bromide (MTT) was obtained from Amresco (Fountain Parkway Solon, OH, USA).
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2

Immunoblotting Assay Protocol

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Immunoblotting was performed as described (Ehrlich et al, 2015 (link)). The following primary antibodies were used: AKT (9272, Cell Signaling), AKT phospho (Ser 473; 4051, Cell Signaling), β-actin (MAB1501, Millipore), β-tubulin (2146, Cell Signaling), Bim (2819, Cell Signaling), Cdk5 (AHZ0492, Life Technologies), COX IV (4844, Cell Signaling), CREB (9104, Cell Signaling), ERK (9102, Cell Signaling), ERK phospho (9106, Cell Signaling), Foxo1 (2880, Cell Signaling), GAPDH (sc-69778, Santa Cruz), HIF1α (610958, BD Biosciences), phospho-histone H2aX (γH2aX, 2577, Cell Signaling), matrix metalloproteinase-9 (MMP-9; 3852 Cell Signaling), MMP-2 (4022 Cell Signaling), NICD-1 (4147, Cell Signaling), NICD-4 (sc-5594, Santa Cruz), Notch 1 (3608, Cell Signaling), Retinoblastoma protein phospho (Ser807/811; 8516, Cell Signaling), Retinoblastoma protein (554136, BD Biosciences), Stat3 phospho (Ser 727; 9134, Cell Signaling), Stat3 (9132, Cell Signaling). Anti-vimentin, -snail, -β-catenin, -claudin-1, N-cadherin were from Cell Signaling (EMT Sampler Kit, 9782), c-Myc (sc-788, Santa Cruz). Loading control by stain-free gels was performed by adding 0.5% TCE (2,2,2-Trichloroethanol, Sigma-Aldrich) to the PAGE gels according to the TGX Stain-Free Gels system (BioRad, Hercules, CA, USA).
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3

Acetylation of Mitochondrial SOD2 Quantification

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Protein samples (10–60 µg) from ethanol-fed and pair-fed controls were separated using 12% SDS-PAGE at 150 V for 1 hour, then transferred to activated Hybond-PVDF membrane (GE Healthcare, Buckinghamshire, UK). Membranes were blocked using 5% (w/v) non-fat dry milk in Tris-Buffered Saline-Tween 20 TBS/0.1 % (v/v) Tween (TBS-T) for 1 hour at room temperature. Membranes were incubated with primary antibodies against SOD2 (ab13534), SOD2 acetyl K68 (ab137037), or SOD2 acetyl K122 (ab214675) (Abcam, Cambridge, MA) overnight at 4°C, then washed three times with TBS-T, and incubated with horseradish peroxidase conjugated secondary antibody at room temperature for one hour. Membranes were washed again with TBS-T three times and then Clarity Western ECL Substrate (BioRad) was applied before imaging via Chemidoc® MP (Bio-Rad, Hercules, CA). 2,2,2-trichloroethanol (Sigma, Saint Louis, MO) stain was used to visualize overall protein load.
Two-dimensional SDS-PAGE was performed using 200 µg of liver whole cell extract and was separated on IPG strips (pH 3–11) (Bio-Rad), then resolved using 10% SDS-PAGE. The proteins were then transferred onto PVDF membrane and probed with anti-SOD2 (ab13534) and SOD2 acetyl-K68 (ab137037) antibody (Abcam, Cambridge, MA) using standard Western blot analysis as described above.
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