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3 protocols using cd11a clone m17 4

1

In vivo T cell Immunophenotyping

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In vivo labeling of T cells with fluorescent antibodies was performed as previously described (Turner et al., 2014). Briefly, mice were administered, PE- or Alexa 647-conjugated anti-CD90.2 (anti-Thy1.2; clone 53-2.1, BioLegend), or PE-conjugated anti-CD45.2 antibody (clone 104, Biolegend), intravenously, and 7–10 minutes later lungs were perfused, dissected and digested in RPMI1640 medium with collagenase D, DNAse and Trypsin inhibitor for 1 hour at 37°C. Mediastinal lymph nodes and spleen were dissected and manually disrupted to generate single cell suspensions. Cell suspensions were stained with fluorescent-conjugated antibodies for CD4 (clones RM4-5, BD Biosciences, and GK1.5, eBioscience), CD8 (clone 53-6.7, BioLegend), CD11a (clone M17/4, BioLegend),CD11b (M1/70 eBioscience), CD11c (N418, eBioscience), CD25 (PC61.5, eBioscience), CD45 (30-F11, BioLegend), CD69 (clone H1.2F3, eBioscience), CD86 (GL-1, Biolegend), CD103 (clone 2E7, eBioscience) and Anti-Mouse MHC Class II (I-A/I-E) (clone M5/114.15.2, eBioscience) was performed according to manufacturers’ protocol. Stained cells were analyzed using the BD LSRII flow cytometer and flow-jo software (Treestar, Ashland, OR). Absolute cell numbers were determined by flow cytometry using CountBright Absolute Counting Beads (Invitrogen) according to manufacturer’s protocol.
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2

Multiparametric Flow Cytometry of Immune Cells

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At indicated time points post-infection, the spleen and mesenteric lymph nodes from male and female mice were collected and mechanically disrupted to obtain a single-cell suspension. RBC lysis buffer from BioLegend (catalog # 420301) was used to remove erythrocytes. Afterward, the cells were washed and incubated with TruStain fcX (CD16/CD32, Clone 93, BioLegend, catalog # 101320) to prevent non-specific binding, and the immune cells of interest were then stained with appropriate surface antibodies. The samples were subjected to analysis using a BD LSRFortessa flow cytometer in combination with FlowJo software (BD Biosciences). The following mouse antibodies, in various fluorochrome combinations, were utilized for the staining: CD4 (clone GK1.5, BioLegend, catalog #100412, #100406), CD8a (clone 53-6.7, BioLegend, catalog, #100707 #100711), CD11a (clone M17/4, BioLegend, catalog # 101106), CD62L (clone MEL-14, BioLegend, catalog #104438), CD49d (clone R1-2, BioLegend, catalog #103618).
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3

Comprehensive Immunophenotyping by Flow Cytometry

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The following antibodies were used in an appropriate combination of fluorochromes: B220 (clone RA3–6B2, BioLegend), Bcl-6 (clone K112–91, BD Biosciences), CD4 (clone GK1.5, BioLegend), CD8α (clone 53–6.7, BioLegend), CD11a (clone M17/4, BioLegend), CD19 (clone 1D3/CD19, BioLegend), CD21 (Clone 7E9, BioLegend), CD23 (Clone B3B4, BioLegend), CD49d (clone R1–2, BioLegend), CD86 (Clone GL-1, BioLegend), CXCR5 (clone L138D7, BioLegend), FoxP3 (clone FJK-16s, eBioscience), GL7 (clone GL7, BioLegend), IFN-γ (clone XMG1.2, BioLegend), IgD (clone 11–26c.2a, BioLegend), IL-2 (clone JES6–5H4, BioLegend), IL-5 (clone TRFK5 BioLegend), IL-17A (clone TC11–18H10.1, BioLegend), PD-1 (clone 29F.1A12, BioLegend), T-bet (clone 4B10, BioLegend), TNF-α (clone MP6-XT22, BioLegend), and appropriate isotype controls.
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