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Malat1

Manufactured by GenePharma
Sourced in China

MALAT1 is a long non-coding RNA that is highly expressed in various cell types. It plays a role in the regulation of gene expression, but its precise functions are still under investigation.

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4 protocols using malat1

1

Affinity Purification of miR-106b-5p and MALAT1

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Biotin-labeled miR-106b-5p and MALAT1 were synthesized by Genepharm and transfected into cells for 48 h. Then, the cells lysates were incubated with M-280 streptavidin magnetic beads (Sigma). TRIzol was used to purify the bound RNAs, and qPCR was employed to measure the level of MALAT1 or miR-106b-5p.
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2

Silencing MALAT1 in A549/T Cells

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A549/T cells were taken for transfection with specific siRNA-MALAT1. The sequence of the sense strand used was MALAT1, 5′-CCC​UCU​AAA​UAA​GGA​AUA​ATT-3′ obtained from GenePharma (Shanghai, China). For transfection, lipofectamine 2000 was used along with siRNA-MALAT1 followed by manufacturer’s protocol. Cells were kept for 4–6 h, later, DMEM was removed and fresh DMEM was added. Transfected cells were used for multiple experiments after 48 h of transfection.
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3

Regulation of HUVEC Proliferation by miR-320a

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MALAT1 siRNAs were specifically designed and synthesized by Shanghai GenePharma Co, Ltd. (Shanghai, China) by targeting MALAT1 sequences (MALAT1-1, 5’-CACAGGGAAAGCGAGTGGTTGGTAA-3’ and 5’-TTACCAACCACTCGCTTTCCCTGTG-3’; and MALAT1-2, 5’-GAGGUGUAAAGGGAUUUAUTT-3’ and 5’-AUAAAUCCCUUUACACCUCTT-3’). A negative control siRNA was also synthesized with targeting sequences of 5’-GGCCUAAAGUAGUAGCUAUTT-3’ and 5’-AUAGCUACUACUUUAGGCCTT-3’.
To assess the effects of miR-320a on regulation of HUVEC proliferation, we had a miR-320a mimic, a miR-320a inhibitor, and control RNA chemically synthesized and purified using high-performance liquid chromatography (GenePharma). The concentration of these synthesized siRNAs (mimic, inhibitor, and negative control) were all 20 μM and the working concentration was 20 nM diluted at 1:1000. Plasmids containing MALAT1 siRNAs were transfected into cells for 48 h using Lipofectamine 2000 (Invitrogen, Carlsbad, CA, USA) according to the manufacturer’s instructions and then the cells were used for our experiments.
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4

MALAT1 Knockdown in vitro

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MALAT1 and all RNA oligoribonucleotides for in vitro studies were purchased from GenePharma (Shanghai, People’s Republic of China). Oligoribonucleotides were performed using Lipofectamine 2000 (Thermo Fisher Scientific). Unless otherwise indicated, 100 nM of RNA duplex or 80 nM of MALAT1-siRNA was used for each transfection, and all the experiments were repeated in triplicate.
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