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Xylose lysine deoxycholate (xld)

Manufactured by Merck Group
Sourced in Germany

XLD is a selective and differential culture medium used for the isolation and identification of Salmonella and Shigella species in clinical and food samples. The medium contains lactose, sucrose, and xylose as carbohydrate sources, along with indicators that allow for the differentiation of lactose-fermenting and non-fermenting organisms. Salmonella and Shigella species appear as colorless or slightly transparent colonies due to their inability to ferment lactose or sucrose.

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14 protocols using xylose lysine deoxycholate (xld)

1

Phenotypic Differences in S. Infantis Strains

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Two phenotypically different S. Infantis field strains, MRS-16/01939 and MRS-17/00712 derived from Austrian broiler flocks, were used. Whereas strain MRS-16/01939 proved multidrug resistant and showed growth of black colonies on xylose–lysine–deoxycholate agar (XLD, Merck, Vienna, Austria), strain MRS-17/00712 was pan-susceptible presenting colourless colonies on XLD. Furthermore, strain MRS-16/01939 was reported to persist on the farm leading to recurrent infections, whereas strain MRS-17/00712 was only isolated once from the farm.
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2

Salmonella Identification Protocol

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Salmonella enterica subsp. enterica serovar Typhimurium ATCC23566 was used in this study. The non-Salmonella strains belonged to the Escherichia, Bacillus, Klebsilla, Shigella, and Enterobacter genera. All the bacterial cultures were obtained from the Department of Microbiology, Faculty of Science, Rangsit University. For the cultivation, Salmonella was subcultured on xylose lysine deoxycholate agar media (XLD; Merck) and incubated at 37°C overnight (16 hr). The non-Salmonella strains were sub cultured on Luria-Bertani agar plate (10 g tryptone; 5 g yeast extract, 10 g NaCl; 15 g agar; and H2O to 1,000 mL) and incubated at 37°C overnight. The culture was used for DNA extraction using the GF-1 Bacterial DNA extraction kit (Vivantis, Malaysia) and measuring the concentration of DNA by using NanoDrop 2000c Spectophotometer (Thermo Scientific).
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3

Isolation and Identification of Shigella

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A fresh fecal specimen was collected from patients and immediately transported to the laboratory within one hour of collection. All specimens were cultured on xylose lysine deoxycholate agar (XLD) (Merck, Germany) and MacConkey Agar (MAC) (Merck, Germany), using a swab and subsequently incubated at 37°C for 24 hours. Specimens were placed in Selenite F enrichment broth (Oxoid), incubated at 37°C for 24 hours. Subsequently subcultured onto Xylose-Lysine Deoxycholate agar (XLD) agar and incubated at 37°C for 18–24 hours. Red colonies suspicious to Shigella, on XLD agar were further identified by biochemical tests using suitable media such as Triple sugar Iron Agar (TSI) for carbohydrate fermentation test, Urea agar for urea utilization test, tryptophan broth for Indole test, Simmon Citrate agar for citrate utilization, SIM media for motility test and Lysine agar for lysine utilization test (6 ). Shigella isolates were sero-grouped by the slide agglutination test, using commercially available antisera (Baharafshan Co. Iran).
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4

Isolation and Identification of Shigella spp.

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First, 500 μL of the liquid stool samples were enriched in 5 mL of Gram-negative (GN) broth (Merck, Hamburg, Germany) and after 6 h at 37°C the enriched samples were streaked on xylose lysine deoxycholate (XLD) and MacConkey agar. In addition, stool samples were directly cultured on MacConkey agar, XLD (Merck) and incubated at 35–37°C for 18–24 h. Individual isolates were surveyed using previously defined standard biochemical and serological tests. All isolates were confirmed to be Shigella spp. applying API 20E test strips (bioMerieux, Craponne, France). Serogrouping of the Shigella spp. isolates was performed using slide agglutination with specific antisera (SSI, Copenhagen, Denmark).8 The confirmed Shigella spp. isolates were kept in brain heart infusion broth with 20% glycerol at −80°C. S. sonnei PTCC 1777 and S. flexneri PTCC 1234 were used as controls in each assay (obtained from the Iranian Research Organization for Science and Technology). S. boydi and S. dysenteriae control strains were obtained from the microbiology department of Arak University of Medical Sciences.
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5

Lettuce Leaves Interaction with Salmonella Enteritidis

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Four whole lettuce leaves were submerged in 100 ml of minimal medium containing 4.4 log CFU/ml of S. Enteritidis SE86 and incubated at 36 ± 1°C for 120 h.
Aliquots of 6 ml were removed every two hours for up to 60 and, after each time period, aliquots were withdrawn every 24 h for up to 120 h of culture in order to determine the emulsification index (IE24), pH, and bacterial count. Bacterial counts were performed in triplicate by seeding the samples onto plates containing xylose lysine deoxycholate agar (XLD: Merck, Darmstadt, Germany) and incubated at 36 ± 1°C for 24 h. The pH was evaluated by aliquots (10 ml) of the samples and then analyzed with a pH meter (PHTECK). The emulsification index (IE24) was assessed using the method described by Cooper and Goldenberg (1987) (link).
All experiments were repeated three times and the averages were subsequently expressed as the final result.
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6

Salmonella Inoculation in Pork

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Previous studies have shown, Salmonella Typhimurium, Salmonella Derby and Salmonella London to be the most common serovars in pig carcasses and retailed pork in Vietnam [12 (link),13 (link),27 ]. These serovars of S. enterica, isolated from pig carcasses and retailed pork in a recent investigation by Dang-Xuan [27 ], were used to make an inoculation medium. First, each serovar was recovered and then cultured separately in a 150 mL-conical flask containing 50 mL Buffered Peptone Water (BPW) (Merck, Darmstadt, Germany) at 37 °C overnight (without agitation). The following day, Salmonella concentration was determined applying a plate count technique using Xylose Lysine Desoxycholate (XLD, Merck) agar for each cultured medium. Duplicate plates were made by spreading 0.1 mL of cultured BPW, diluted 10-fold with Maximum Recovery Diluent (MRD, Merck), on XLD plates and incubated at 37 °C for 20–24 h. After determining the Salmonella concentration, the culture was diluted to a concentration of 105 CFU/mL. Following this 5 mL of medium containing each incubated serovar of Salmonella with 105 CFU/mL were mixed, and 15 mL of the medium prepared. Then, MRD (90 mL) was added to 10 mL of the inoculated medium to achieve a concentration of 104 CFU/mL medium (100 mL), which was then used to inoculate the pork.
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7

Salmonella Detection in Turtle Cloacal Swabs

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Samples were examined for the presence of Salmonella by using ISO 6579:2002 (ISO, 2002) . In brief, cloacal cotton swab samples from the turtles were placed in 9 ml aliquots of buffered peptone water (BPW; Merck, Germany) and incubated at 37 °C for 24 hours. The suspensions were placed on modified semisolid Rappaport medium (MSRV; Merck, Germany) and incubated at 42 °C for 24-48 hours, streaked on xylose-lysinedeoxycholate agar (XLD; Merck, Germany) and on Hektoen enteric agar (HE; Merck, Germany), and incubated at 37 °C for 24 hours. The plates were inspected after 24 hours, and positive colonies were transferred onto triple sugar iron agar (TSI; Merck, Germany) and on motility indole-lysine agar (MIL; Merck, Germany). Colonies, either from XLD or HE, that tested positive on both TSI and MIL were identified as having Salmonella.
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8

Microbial Analysis of Raw Beef Patties

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Each raw beef patty sample was collected under aseptic conditions and mixed with buffered peptone water (Panreac, Darmstadt, Germany). To determine the TVC, Plate Count Agar (PCA; Panreac) was employed and incubated at 37 °C for 48 h. Enumeration of the LAB was performed using De Man, Rogosa, and Sharpe agar (MRS; Merck, Darmstadt, Germany), with an incubation period of 48 h at 37 °C. For Enterobacteriaceae enumeration, Violet Red Bile Glucose Agar (VRBG; Panreac) with a double layer was used and incubated at 37 °C for 24 h. Microbiological analyses were conducted in duplicate, and microbial counts were expressed as logarithms of colony-forming units per gram (log CFU/g). Additionally, the presence of Salmonella sp. was assessed in 25 g of the beef patties. For this purpose, a 25 g sample was mixed with 225 mL of sterile buffered peptone water solution (0.1%, Panreac) for bacterial prepropagation. Selective proliferation of bacteria was carried out using Rappaport-Vassiliadis Soy Broth medium (Merck) and bacterial isolation was performed using Hektoen (Merck KGaA, Darmstadt, Germany) and Xylose Lysine Deoxycholate (XLD; Merck) agars. Previously, the microbiological characterization of CF was conducted, and the results are as follows: TVC: 6.83 log CFU/g; Enterobacteriaceae: <1.6 log CFU/g; LAB: 2.71 log CFU; Salmonella sp.: absence; and Listeria monocytogenes: absence.
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9

Salmonella Detection Protocol

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The detection of Salmonella spp. was performed in accordance with DIN EN ISO 6579-1. For pre-enrichment, the swabs were immersed in pre-warmed buffered peptone water (BPW) (Merck, Darmstadt, Germany) and incubated at 37 ± 1 °C for 18 h. The swab samples were fully covered with peptone water during this process.
For cultivation, three droplets of the incubated BPW (≥0.1 mL in total) were pipetted separately onto a modified semi-solid Rappaport–Vassiliadis (MSRV) medium (Oxoid, Waltham, MA, USA). The plates were then incubated at 41.5 °C for 24 ± 3 h.
After the initial 24 ± 3 h of incubation, the plates were examined for any signs of growth. If no growth was observed, the plates were further incubated for an additional 24 ± 3 h and rechecked.
In the event that a swarming zone was detected, colonies were subcultured from the outer swarming zone onto agar modified with xylose lysine deoxycholate (XLD; Merck, Darmstadt, Germany) and Rambach agar (Merck, Darmstadt, Germany). The subcultures were then incubated at 34–38 °C for 24 ± 3 h. Presumptive Salmonella isolates were subsequently transferred onto Columbia agar (Merck, Darmstadt, Germany) with sheep blood (Thermo Scientific, Waltham, MA, USA) and incubated for 24 ± 3 h. The confirmation of Salmonella spp. was achieved using MALDI-TOF mass spectrometry (Bruker, Billerica, MA, USA) after this step.
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10

Bacterial Strains for Phage Isolation

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The bacterial strains that were selected for the host range screen and other experiments are listed in Table 1. In addition, S. enterica subsp. enterica serotype Typhi NCTC 160 was used as a host strain for the isolation and characterization of the phage. The bacterial culture was grown at 37 °C in tryptone soy broth (TSB) (Oxoid, Basingstoke, UK) or xylose lysine deoxycholate (XLD) (Merck, Darmstadt, Germany).
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