The negative ion mode is set as follows: Agilent Poroshell 120 SB-C18 (100 mm × 4.6 mm, 2.7 μm) is used; the mobile phase consists of water (A)–acetonitrile (B); gradient elution conditions are 0–30 min, 5–100% B; the flow rate is 0.8 ml min−1; the column temperature is 30°C; the injection volume is 5 μl; the drying gas flow is 11 L/min; the drying gas temperature is 250°C; the Vcap is 3,500 V; the neutralizer pressure is 45 psig; the fragmentor voltage is 125 V; the skimmer voltage is 65 V; the mass scanning range is 50–1,000 m/z; and the secondary MS collision voltage is 40 eV (Wang et al., 2021 (link)).
Poroshell 120 sb c18
The Poroshell 120 SB-C18 is a high-performance liquid chromatography (HPLC) column designed for the separation and analysis of a wide range of organic compounds. It features a 120 Å porous shell particle structure with a C18 stationary phase, providing efficient and high-resolution separations.
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34 protocols using poroshell 120 sb c18
LCMS Analysis of Compounds in Positive and Negative Modes
The negative ion mode is set as follows: Agilent Poroshell 120 SB-C18 (100 mm × 4.6 mm, 2.7 μm) is used; the mobile phase consists of water (A)–acetonitrile (B); gradient elution conditions are 0–30 min, 5–100% B; the flow rate is 0.8 ml min−1; the column temperature is 30°C; the injection volume is 5 μl; the drying gas flow is 11 L/min; the drying gas temperature is 250°C; the Vcap is 3,500 V; the neutralizer pressure is 45 psig; the fragmentor voltage is 125 V; the skimmer voltage is 65 V; the mass scanning range is 50–1,000 m/z; and the secondary MS collision voltage is 40 eV (Wang et al., 2021 (link)).
HPLC-ESI-TOF-MS Analysis of GCE, eGCE and Tannic Acid
The time of flight (TOF) mass detector (G1969A, Agilent, US) was equipped with electrospray ionization (ESI) interface. The ESI voltage was 3.5 kV, and a mass range of 50-3000 m/z was scanned in negative full scan mode. Data processing was performed on Agilent Mass Hunter (v.B.01.04) software.
Quantitative Analysis of Phytohormones
Metabolomic Analysis of EMT Dynamics
Metabolomics data analysis: Metabolomics study was completed by quantitative untargeted LC-MS utilizing Q-TOF 6545 mass spectrometer connected to an Agilent 1290 UHPLC system with a Poroshell 120 SB-C18 (2 × 100 mm, 2.7-μm particle size) column. Metabolomics data was generated and received from CCIC. Masshunter software (Agilent Technology) was used for acquiring data and peaks were integrated using Progenesis (Agilent Technology). Compounds were identified with XCMS as well as Metaboanalyst 5.0 software. Peak areas were normalized using internal standards and were subjected to relative quantification analyses with control (no treatment).
HPLC Analysis of Metabolites
Quantifying Gibberellic Acid in Plant Tissues
The analytical column was a poroshell 120 SB‐C18, 2.1 × 150 mm, with a particle size of 2.7 μm (Agilent, America). The analytical column was sequentially eluted using mobile phase A (methanol containing 0.1% formic acid) and mobile phase B (water containing 0.1% formic acid). The linear gradient for phase A was as follows: 0–2 min, 20%; 2–14 min, 20%–80%; 14–15 min, 80%; 15.1 min, 20%; and 15.1–20 min, 20%. Mass spectra were acquired in positive ion mode. The settings of the mass spectrometer were as follows: Curtain gas 15 psi; ionspray voltage, 4500 V; ionspray temperature, 400 °C. The GA components were quantified according to the standards of GA1, GA3 and GA4.
UPLC-MS Analysis of Phenolic Compounds
Metabolite Profiling by LC-MS
Mass spectrometry analysis was performed in the positive ion mode. The following conditions were used: spray voltage, 3.5 kV; sheath gas flow rate, 35 arb; auxiliary gas flow rate, 10 arb; purge gas flow rate, 2 arb; ion transfer tube temperature, 320 °C. Parent ion full-scan mass spectrum acquisition was performed in the range of 100–1000 mass/charge (m/z).
Quantifying Endogenous Plant Hormones in Arabidopsis
HPLC analysis was performed using a poroshell 120 SB-C18 (Agilent, United States) column (150 × 2.1 mm × 2.7 μm). The mobile phase A solvents consisted of methanol + 0.1% methanoic acid and the mobile phase B solvents consisted of ultrapure water + 0.1% methanoic acid. The injection volume was 2 μL. MS conditions were as follows: the spray voltage was 4,500 V; the pressure of the air curtain, nebulizer, and aux gas were 15, 65, and 70 psi, respectively, and the atomizing temperature was 400°C.
HPLC analysis of OP and GEM
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