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Western blot stripping buffer

Manufactured by Thermo Fisher Scientific
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Western blot stripping buffer is a chemical solution used to remove primary and secondary antibodies from a blot membrane, allowing the membrane to be reused for additional probing. The buffer's core function is to effectively strip the membrane of bound antibodies, preparing the membrane for further analysis or reprobing.

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25 protocols using western blot stripping buffer

1

Western Blot Analysis of Apoptosis Markers

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Whole cell lysis was carried out using Cell Lysis Buffer (Cell Signaling Technology, MA, USA) according to the manufacturer’s protocol, with the addition of Protease Inhibitor Cocktail (BioShop, Canada). Total protein was quantified with Pierce BCATM Protein Assay Kit (Thermo Fisher Scientific, MA, USA). Protein extract was separated on a polyacrylamide gel and transferred to a nitrocellulose filter (Bio-Rad, CA, USA) by wet-electroblotting. Subsequently, the immobilized proteins were incubated with the appropriate primary antibody: cytochrome c (#11940), Smac/Diablo (#2954), HtrA2/Omi (#9745) and β-Tubulin (#2128) (Cell Signaling Technology, MA, USA). Finally, the appropriate secondary antibody conjugated with horseradish peroxidase (#7074, Cell Signaling Technology, MA, USA) was applied. Detection was executed by chemiluminescence, using Clarity™ Western ECL Substrate (Bio-Rad, CA, USA). Western blot stripping buffer (Thermo Scientific, MA, USA) was used to remove the antibodies from the membrane.
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2

Western Blot Analysis of tBHP-Induced Oxidative Stress

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The HEPG2 cells were preincubated with or without 50 µM of KC for 1 h and then treated with or without 0.5 mM of tBHP for 12 h. Then cellular proteins were extracted in radioimmunoprecipitation assay buffer (RIPA buffer). The protein concentration was measured using Bradford’s assay and 30 µg of protein from each sample was subjected to Western blot analysis. For the Western blot analysis, the protein was separated on an SDS-PAGE gel by electrophoresis and electrophoretically transferred to a polyvinylidene fluoride (PVDF) membrane. The membranes were incubated with various primary antibodies overnight and after washing in tris-buffered saline with 1% Tween 20 (TBST) buffer, the membranes were further incubated with appropriate corresponding horseradish peroxidase-conjugated secondary antibodies. After further washing, the proteins on the membranes were visualized using an enhanced chemiluminescence reagent (Dogenbio). The membranes were stripped with Western blot stripping buffer (Thermo scientific) and incubated with actin antibodies and the immunoblotting procedure repeated. The protein bands were quantified using ImageJ analysis software and normalized to the expression of the internal control β-actin; the results were further normalized to the control.
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3

Western Blot Characterization of GFP

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Proteins were separated in a SDS-PAGE gel by electrophoresis and transferred onto polyvinylidene fluoride (PDVF) membrane33 (link). Membranes were blocked with TBST (TBS with 0.1% tween 20) containing 5% milk powder (blocking buffer) for 1 h at room temperature or overnight at 4°C. Membranes were immunoblotted with the anti-GFP mouse antibody (diluted 1:500 in blocking buffer) for 1 h at room temperature or overnight at 4°C. Membranes were washed and then incubated with the HRP-conjugated anti-mouse secondary antibody (diluted 1:2500 in blocking buffer) for 1 h at room temperature. Membranes were then incubated in ECL select substrate and bands visualised using the ChemiDocTM XRS system (Bio-Rad)34 (link)35 (link). Blots probed with the anti-GFP mouse antibody were stripped with western blot stripping buffer (Thermo Scientific) and reprobed with the anti-VSVG rabbit antibody (diluted 1:1000) in blocking buffer) and the HRP-conjugated anti-rabbit secondary antibody (diluted 1:2500 in blocking buffer) as described above.
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4

Chromatin Modification Analysis Protocol

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Antibodies (Abs) for H3K4me3 and H3K27me3 were purchased from Abcam (Cambridge, MA, USA); Abs for H3K9ac, H3K14ac, H3K18ac, H3K27ac, H3K56ac, Histone H3 and GAPDH from Cell Signaling Technology (Danvers, MA, USA); HRP-linked anti-rabbit and HRP-linked anti-mouse secondary Abs, western blot stripping buffer, protease inhibitor tablet, phosphatase inhibitor tablet and PowerUp SYBR green master mix for real-time quantitative PCR from Thermo Fisher Scientific (Waltham, MA, USA). RNeasy plus kit was ordered from Qiagen (Hilden, Germany). LunaScript RT SuperMix Kit from NEB (Ipswich, MA, USA).
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5

Western Blot Analysis of Protein Samples

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Protein samples were subjected to sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). Separated proteins were transferred onto a nitrocellulose membrane and incubated with corresponding primary antibodies PTBP1 (1:1000), PTN (1:1000), GAPDH (1:2000) for 1 h followed by horseradish peroxidase-conjugated secondary antibodies (1:5000) for 30 min. Signals were detected using an ECL kit (Invitrogen, Cat# WP20005). For sequential immunoblotting experiments, the membranes were washed with Tris-buffered saline and treated with Western Blot Stripping Buffer (Thermo Scientific, USA) for 1 h. After washing and re-blocking, the membranes were incubated with other primary antibodies if necessary.
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6

Comprehensive Western Blotting Procedure

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Cell lysis was carried out using Cell Lysis Buffer (Cell Signaling Technology, MA, USA) as per the manufacturer's protocol. Total protein quantification was performed using Pierce BCA™ Protein Assay Kit (Thermo Fisher Scientific, MA, USA).
Each western blot followed a similar procedure. Protein extract was separated on a polyacrylamide gel and transferred to a nitrocellulose filter (Bio-Rad, CA, USA) by wet electroblotting. Subsequently, the immobilized proteins were incubated with appropriate primary antibody, specific for PPARα (SAB2101852), PPARγ (SAB2101853), and PPARδ (AV32880) as well as for selected in silico WT1 (SAB2102716), THRB (AV36994), and TCF20 (SAB2106444) from Sigma-Aldrich, MO, USA, or β-actin (#8457) or β-tubulin (#2128) from Cell Signaling Technology, MA, USA. Finally, appropriate secondary antibody conjugated with horseradish peroxidase (#7074, Cell Signaling Technology, MA, USA) was applied. Detection was executed by chemiluminescence, using Clarity™ Western ECL Substrate (Bio-Rad, CA, USA). To remove the antibodies from the membrane, we used western blot stripping buffer (Thermo Scientific, MA, USA).
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7

Quantitative Protein Analysis of Podocytes

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Total protein of podocytes or kidneys were extracted, and protein concentration was determined using bicinchoninic acid kits (AmyJet Scientific). Proteins were separated using 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transferred onto polyvinylidene difluoride membranes. Membranes were blocked with 5% skim milk and incubated at 4 °C overnight after treatment with primary antibodies TRPC6 (RRID: AB_11027546, 1:1500; RRID:AB_10077516, 1:1000), nephrin (RRID: AB_11040198, 1:1000), podocin (RRID: AB_2892752, 1:1000), and β-actin (RRID: AB_10077516, 1:5000). Membranes were then incubated with the corresponding secondary antibodies (RRID:AB_2747412, 1:5000) at room temperature for 2 h after washing with phosphate-buffered saline. De-hybridization were performed with the Western blot stripping Buffer (21059, Thermo Scientific) to reuse the same blots for other molecules detection. The protein bands were visualized using an ECL reagent (Thermo Scientific) and quantified using ImageJ software (NIH).
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8

Cytotoxicity Evaluation of PSMA-617 in Cells

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PSMA-617 (ABX Advanced Biochemical Compounds); WST-1 assay kit and Cytotoxicity detection kit (lactate dehydrogenase, LDH) (Roche); Propidium Iodide(PI) Reagent (Invitrogen); cresyl violet (Sigma-Aldrich); PRMI 1640 culture medium, HAM’-12 medium, foetal bovine serum (FBS) and penicillin/streptomycin solution (10,000 U/ml) (Gibco™); Cellytic™ MT Cell Lysis Reagent (Sigma-Aldrich); halt protease and phosphatase inhibitor and Pierce™ BCA protein assay kit (Thermo Scientific); Western Blotting Luminol Reagent (Santa Cruz Biotechnology); Immobilon-P polyvinylidene difluoride membrane (PVDF) (Millipore); high performance chemiluminescence film (Amersham International plc); Western Blot Stripping Buffer (Thermo Scientific). All other chemical substances, which are not explicitly mentioned, were purchased from Sigma-Aldrich or Merck.
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9

Western Blot Analysis of Protein Expression

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Cells were cultured to confluence and washed with PBS. Cell extracts and cytoplasmic/nuclear fractions were prepared as previously described.24 (link) Proteins were resolved by 4-12% SDS polyacrylamide gel electrophoresis and transferred to a nitrocellulose membrane. Blots were incubated with antibodies against DDX5 (1:1000), SP1 (1:1000), hnRNPD (1:1000) or GAPDH (1:2000 dilution) overnight at 4°C followed by incubation with HRP-conjugated secondary antibody (1:5000) for 1 hr at room temperature. Signals were detected using a ECL kit (Invitrogen, USA). For sequential immunoblotting experiments, the membranes were washed with Tris-buffered saline and treated with Western Blot Stripping Buffer (Thermo Scientific, USA) for 1 h. After washing and re-blocking, the membranes were incubated with other primary antibodies if necessary.
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10

Ibrutinib and Cobicistat Effects on CLL Cells

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Primary CLL cells treated with ibrutinib and/or cobicistat were stimulated by spinning onto a 6-well plate coated with anti-IgM antibody (Jackson ImmunoResearch Laboratories) at a concentration of 10 μg/mL. After 15 minutes of stimulation, cell lysates were collected and analyzed by SDS-PAGE. Protein was transferred to nitrocellulose and blots were probed with primary antibodies and horseradish peroxidase (HRP)-conjugated secondary antibodies. Blots were imaged using WesternBright chemiluminescent substrate (Advansta) on an X-ray film. Phosphorylated proteins were analyzed first, then antibodies were removed using Western Blot Stripping Buffer (Thermo Fisher Scientific) before analyzing total protein. Membranes were stripped after imaging total proteins before analyzing loading control. DC9 cell line lysates were used as positive controls. Loading controls were assessed for each membrane and are presented with corresponding proteins analyzed on the same membrane.
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