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7 protocols using human b cell isolation kit

1

Isolation and Purification of Human B Cells

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PBMC’s were isolated from leukocyte reduction cone obtained from Degowin Blood Center at the University of Iowa Hospital and Clinics. Donors are anonymous and have provided written informed consent to allow their cells that are normally discarded to be used in research studies. The recruitment protocol and written informed consent document were approved by the Institutional Review Board for the University of Iowa. All samples were provided to investigators de-identified. Therefore, further IRB approval for the use of the cells by the investigators was not needed based on Federal Regulation 46.101.B4. All experiments were performed in accordance with approved guidelines. PBMC’s were isolated via density gradient using Lymphoprep (StemCell Technologies 07801). B cells were isolated from PBMCs using a negative selection Human B Cell Isolation kit (StemCell Technologies 17954) following the provided protocol. B cells were rested at 37 °C in Complete RPMI 1640 media until used and used within 5 h of negative selection.
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2

PBMC Isolation and Cryopreservation from SLE Patients

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Whole blood from SLE patients and healthy controls was collected into sodium-heparin tubes (BD Biosciences, San Jose, CA, USA) and diluted 1:1 with PBS prior to isolation of peripheral blood mononuclear cells (PBMCs). PBMCs were purified by density gradient using Ficoll-Paque (GE Healthcare Life Science, Marlborough, MA, USA) in Leucosep tubes (Greiner Bio One, Monroe, LA, USA) per protocols provided by the manufacturer. Blood plasma was collected after centrifugation of blood. The PBMC layer was extracted and washed twice with PBS prior to cryopreservation in Recovery Cell Culture Freezing Medium (Gibco, Grand Island, NY, USA) at 107 PBMCs per ml. PBMC vials were frozen at -80°C overnight prior to long-term storage in liquid nitrogen. Plasma was aliquoted and stored at -80°C until further use. For in vitro experiments, B cells were isolated from PBMCs derived from healthy donor whole blood buffy coats available from the Stanford Blood Center. B cells were subsequently isolated using the Human B Cell Isolation Kit (Stemcell Technologies, Vancouver, BC, Canada) according to manufacturer’s protocol. Purity and viability was >97% as assessed by flow cytometry.
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3

Generating B Cell Lines from PBMCs

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B cell lines (BCL) were generated using PBMC and immortalized with Epstein-Barr virus (EBV). Frozen PBMC were thawed and incubated with 2.5 mL of supernatant from B95-8 cell lines for 2 h in a 37°C water bath. A total of 1 μg/mL of cyclosporine in 5 mL of R10 was then added to the cell suspension and incubated in a T25 flask for 3 weeks at 37°C. B cells that were difficult to immortalize in this manner were first purified using a human B cell isolation kit (STEMCELL) and then incubated with B95-8 supernatant.
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4

Isolation of PBMCs and B/T cells

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PBMCs were isolated from donors by Lymphoprep (STEMCELL Technologies) gradient centrifugation. Total CD19+ B cells were isolated by negative magnetic selection using a Human B Cell Isolation Kit (STEMCELL Technologies). In the B and T cell coculture experiments, CD3+ cells were first isolated using the Release Human CD3 Positive Selection Kit (STEMCELL Technologies).
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5

Isolation of Human and Mouse B Cells

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CD19+ human B cells were separated from PBMC using the Human B cell Enrichment Kit or the Human B cell Isolation Kit (both stemcell, Canada) according to the manufacturer’s instructions. The purity of the separated cells as monitored by flow cytometry was always ≥ 93%. CD19+ mouse B cells were separated from spleen cells using the Mouse CD19 Positive Selection Kit II, and CD4+ and CD8+ T cells were separated after PE staining with the PE Selection Kit (both stemcell, Canada) according to the manufacturer’s instructions.
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6

Isolation of SARS-CoV-2 Antibody-Secreting B Cells

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Blood samples were obtained from patients who were recovered from COVID-19 for 10 weeks and had a negative nucleic acid test. Samples with serum antibody titer over 1 × 106 were chosen for the PBMC separation using Ficoll density gradient centrifugation method. B cells were enriched with a human B Cell Isolation Kit (Stemcell). Afterwards, B cells were then stained with APC-Alex700 labeled anti-CD19 (BD), BV421 labeled anti-CD27 (BD), BV510 labeled anti-IgG (BD), Biotin labeled RBD (Sino Biological), PE labeled streptavidin (ThermoFisher) and 7AAD (BD). Single memory B cells with potential SARS-CoV-2 antibody secretion were sorted out by gating 7AAD, CD19+, CD27+, IgG+, and RBD+ using a BD Aria III cell sorter with fluorescence-activated cell sorting modules. B cells were suspended into lysis buffer and quickly frozen. B cell mRNA was subsequently converted to cDNA by SuperScript III Reverse Transcriptase (Invitrogen) and V genes were rescued by PCR. Linear Cassettes were composed of CMV promoter VH or VL and polyA tail, and were used for expressing a small amount of antibody for preliminary screening.
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7

Characterization of EBV-specific T-cells

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B cells were purified by negative selection using a human B cell isolation kit (STEMCELL Technologies, Vancouver, BC, Canada). CD19.CAR-modified EBV-specific T-cells (EBVSTs) were co-cultured with B cells at a 1:1 ratio, with or without overlapping peptide libraries spanning the protein sequences (pepmixes) of EBNA-1, LMP-1, LMP-2 and BARF-1. Cells were stained with anti-CD3 and goat anti-human IgG (H+L) AF647 antibodies and acquired for 100 seconds using Gallios flow cytometer (Beckman Coulter Inc., Brea, CA) on Day 0 and 7 of each stimulation.
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