The largest database of trusted experimental protocols

50 protocols using g3250

1

TUNEL Assay After Triton X-100 Permeabilization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Sections were first permeabilized with 0.1% Triton X-100 for two hours. TUNEL was then done following the manufacturer’s protocol (Promega G3250). Sections were then processed for IHC as described above.
+ Open protocol
+ Expand
2

Detecting Neuronal Apoptosis via TUNEL

Check if the same lab product or an alternative is used in the 5 most similar protocols
To detect neuronal apoptosis in the brain, TUNEL assay (Promega, G3250) was performed on brain sections according to the manufacturer’s instructions. The stained sections were observed and captured using an inverted fluorescence microscope. The number of TUNEL+ cells was counted.
+ Open protocol
+ Expand
3

Apoptosis Identification via TUNEL Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were seeded onto a slide and fixed at 4℃ for 25 minutes. The slides were washed with phosphate buffer saline (PBS) twice for 5 minutes, and then treated with 70% ethanol at -20℃ overnight. Next, slides were incubated with equipment buffer for 10 min at RT. Subsequently, the slides were incubated with terminal transferase (TDT) working solution followed with 4', 6-diamidino-2-phenylindole (G3250, Promega) according to standard protocols. The slides were then observed by fluorescence microscopy (MDI6000B, Leica, Germany). The nuclei of apoptotic cells exhibited green fluorescence, and the nuclei of all cells exhibited blue fluorescence.
+ Open protocol
+ Expand
4

Apoptosis Assessment via TUNEL and Caspase 3 Immunohistochemistry

Check if the same lab product or an alternative is used in the 5 most similar protocols
In situ terminal deoxynucleotidyl transferase-mediated dUTP-biotin end-labeling of fragmented DNA (TUNEL) and IHC of affinity-purified polyclonal rabbit immunoglobulin G directed specifically against the active form of caspase 3 (1:1000, Rabbit, Abcam, Cambridge, UK, ab13847) and the anti-ssDNA (promega, USA, G3250) were used to identify apoptotic cells according to previously reported methods [10 (link)–11 (link)].
Double-labeled IHC against ssDNA and NeuN (1:100, Millipore, ABN78) was performed to determine the phenotype of ssDNA-positive cells. We first performed ICH for ssDNA (promega, USA, G3250) using DAB/peroxidase, followed by NeuN (1:100, Millipore, ABN78) using Vector blue/alkaline phosphatase using the SP system.
To examine menin expression in cleaved-caspase 3-positive cells, we performed double-labeled IHC against menin (1:200, rabbit, Cell Signaling Technology, MA, USA, #6891) and cleaved-caspase 3 (1:400 rabbit, Abcam, Cambridge, UK, ab13847) using the same method. We first performed IHC for cleaved-caspase 3 using DAB/peroxidase, followed by menin using Vector blue/alkaline phosphatase using the SP system.
+ Open protocol
+ Expand
5

Apoptosis Assay in Lung Cancer Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Grow A549 and H460 cells on 96-well plates and incubate cells with paclitaxel (5 nmol/L), etoposide (100 nmol/L) with or without M3814 (5 μmol/L) for 48 h, wash the slides twice with PBS and process directly according to manufacturer's instructions (Promega corporation G3250). Briefly, permeabilize cells by immersing the slides in 0.2% Triton® X-100 solution for 5 min, and equilibrate at room temperature for 5–10 min. Add 50 μL of rTdT incubation buffer to the cells on a 5 cm2 area. Cell nuclei were stained with DAPI to assess gross cell morphology. Immediately analyze TUNEL fluorescence under a fluorescence microscope using fluorescein at 520 nm and DAPI at 460 nm.
+ Open protocol
+ Expand
6

Apoptosis Detection in hTERT-HM Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The hTERT-HM cells were grown on chamber slides and fixed with 4% paraformaldehyde for 25 min at room temperature and stored in PBS at 4°C. Cells were permeabilized with 0.2% Triton-X in PBS and stained with a fluorometric TUNEL assay as per the manufacturer's instructions (#G3250; Promega).
+ Open protocol
+ Expand
7

Apoptosis Analysis of Blastocysts

Check if the same lab product or an alternative is used in the 5 most similar protocols
Five days after IVF, blastocysts from wild-type control, AKITA, and STZ-injected mice were immediately fixed with 4% PFA and then washed three times with 0.1% PVP. The blastocysts were then incubated with 0.1% Triton X-100 in PBS at room temperature for 30 min. To visualize blastomere apoptotic status, blastocysts were treated with an incubation buffer containing equilibration buffer, nucleotide mix, and rTdT enzyme (G3250, Promega, Madison, WI, USA) at 37℃ for 1 hr. Blastocysts were mounted with DAPI-containing mounting solution. The apoptotic and total blastomere numbers were measured by Z-stack confocal microscopy.28 (link)
+ Open protocol
+ Expand
8

Microsclerodermin A Induces Apoptosis

Check if the same lab product or an alternative is used in the 5 most similar protocols
To determine induction of apoptosis, a commercially available kit from Promega (G3250; Madison, WI) to measure fragmented DNA by incorporating fluorescein 12-dUTP at 3′-OH DNA ends using the Terminal Deoxynucleotidyl Transferase enzyme was used following manufacturer’s protocol. Briefly, 500,000 cells were plated in a 6-well plate. Cells were allowed to adhere overnight then treated with 2.4 μg/mL microsclerodermin A (2X IC50 for NFκB inhibition) or its vehicle control for 24 hours. At the end of treatment, cells were trypsinized, fixed with 4% paraformaldehyde and permeabilized with ice cold ethanol. Cells were transferred to a 96 well U-bottom plate, equilibrated for five minutes and then treated with 25 μl of a reaction mix containing the nucleotide mix and the enzyme to label the fragmented DNA for 60 minutes at 37°C. The reaction was stopped by the addition of 20mM EDTA. The resulting fluorescence was visualized via flow cytometry in a BD FACSCanto equipped with a plate adapter, acquiring 20,000 events. Statistical significance was determined using a student’s T test comparing results to vehicle control.
+ Open protocol
+ Expand
9

TMJ Histological Analysis in β-catenin Mice

Check if the same lab product or an alternative is used in the 5 most similar protocols
We dissected TMJs from β-catenin(ex3)Co12ER mice and Cre-negative control mice. Samples were fixed in 10 % formalin, decalcified, and embedded in paraffin. The condyles were sectioned into serial sections at 3 µm thick in an anterior-posterior direction. Cell proliferation was carried out using anti-PCNA antibody at the dilution of 1:200 (abl8197, ABCAM®, Cambridge, UK). Apoptosis assay was carried out using a TUNEL assay kit according to the manufacturer’s instructions (G3250, Promega, Madison, WI, USA).
+ Open protocol
+ Expand
10

Xenograft Tumor Analysis via IHC and TUNEL

Check if the same lab product or an alternative is used in the 5 most similar protocols
Xenograft tumors were harvested, and fixed in 4% PFA for 48 h. The fixed samples were embedded in paraffin and sectioned. The IHC staining of paraffin-embedded tissues was performed using OFD1 (this paper, 1:3000 dilution) primary antibodies and the peroxidase Elite ABC-HRP Kit (VECTOR LABORATORIES, PK-6200) according to the manufacturer’s instructions. TTF-1 staining in xenografts was classified as strongly positive, moderately positive, or weakly positive using previously described criteria (Saad et al., 2004). For the detection of apoptotic cells, TUNEL staining was performed on tumor xenograft sections according to the manufacturer’s instructions (Promega, G3250).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!