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Anti phospho p65

Manufactured by Santa Cruz Biotechnology
Sourced in United States

Anti-phospho-p65 is a primary antibody that detects the phosphorylated form of the p65 subunit of the NF-kB transcription factor. It is used for the detection and quantification of activated NF-kB in various experimental systems.

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10 protocols using anti phospho p65

1

Investigating Inflammatory Signaling Pathways

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LPS (Escherichia coli, O127:B8) was purchased from Sigma-Aldrich (St. Louis, MO, USA). Mas receptor antagonist A779 was obtained from AbBiotech (San Diego, CA, USA). ACE2 inhibitor MLN-4760 was a product from EMD Millipore (Darmstadt, Germany). SB203580 (a specific inhibitor of p38 MAPK), PD98059 (a specific inhibitor of ERK1/2) and SP600125 (a specific inhibitor of JNK) were purchased from Santa Cruz Biotechnology (Delaware, CA, USA). Rabbit anti-ACE2, anti-p50, anti-p65, and mouse anti-phospho-p50, anti-phospho-p65 and anti-IκBα antibodies were procured from Santa Cruz Biotechnology. Rabbit anti-p38 MAPK, anti-phospho-p38 MAPK, anti-ERK1/2, anti-phospho-ERK1/2, anti-/JNK, anti-phospho-JNK, horseradish peroxidase (HRP)-conjugated goat anti-rabbit IgG, and horse anti-mouse IgG antibodies were purchased from Cell Signaling Technology (Danvers, MA, USA). TNF-α and IL-1β kits were purchased from Invitrogen (Eugene, OR, USA). AngII and Ang-(1-7) enzyme-linked immunosorbent assay (ELISA) kits were from Kamiya Biomedical (Seattle, WA, USA).
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2

Modulation of Th17 Signaling Pathways

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After treatment for 2 h with or without etanercept (0.1 and 1 μg/mL) or adalimumab (1 and 10 μg/mL), cells were stimulated with the Th17-polarized panel and subsequently lysed with an equal volume of ice-cold lysis buffer (150 μl) 1 h later for MAPKs, p65-NFκB and STAT3 signalling and 24 h later for RORγt signalling. After centrifugation at 13,000 × g for 15 min, cell lysates were analysed by western blot with anti-MAPK (p38 and ERK), anti-phospho-MAPK (pp38 and pERK), anti-p65, anti-phospho-p65, anti-STAT3, anti-phospho-STAT3, and anti-RORγt antibodies (Santa Cruz Biotechnology, Santa Cruz, California, USA). The immunoreactive bands were visualized using a horseradish peroxidase-conjugated secondary antibody and an enhanced chemiluminescence system (Amersham Pharmacia Biotech, Sunnyvale, California, USA).
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3

Western Blot Analysis of Protein Signaling

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Cells and fresh frozen tumor tissues were homogenized in NP-40 lysis buffer (1% NP-40, 20 mM Tris–HCl pH 8, 137 mM NaCl, 10% glycerol, 2 mM EDTA, 1 mM sodium orthovanadate, 10 µg/mL aprotinin, 10 µg/mL leupeptin). Protein concentrations were determined using the Bradford protein assay (Bio-Rad Laboratories, Milano, Italy). Then, 30 µg protein/sample were separated by SDS-PAGE and blotted on a PVDF membrane. The following antibodies were used: anti-PTX3 (from B. Bottazzi, Humanitas Clinical Institute, Rozzano, Italy), anti-TLR4 (Bio-Rad), anti-phospho IRAK1 (Sigma-Aldrich, MO, USA), anti-phospho AKTser473 (Cell Signaling Technology, MA, USA), anti-phospho p65 (Santa Cruz Biotechnology, CA, USA). To normalize the amount of loaded proteins, all blots were probed with anti-β-actin (Sigma-Aldrich), anti-α-tubulin (Sigma-Aldrich), anti-GAPDH (Santa Cruz Biotechnology) or anti-HSC70 (Santa Cruz Biotechnology) antibodies. All primary antibodies were diluted 1:1000 and the secondary HRP-conjugated antibodies 1:5000. Chemiluminescent signal was automatically acquired by ChemiDoc™ Imaging System (Bio-Rad) at a final resolution of 62.2 pixel/mm2.
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4

Transcription Factor Activation Assay

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Tris-base, Gly, NaCl, SDS, MTT, and BSA were purchased from Sigma-Aldrich (St. Louis, MO, USA). The LightShift® Chemiluminescent EMSA Kit was purchased from Thermo Fisher Scientific Inc. (Waltham, MA, USA). Anti-phospho-IKKα/β, anti-IKKβ, anti-IκBα anti-IKKα, anti-phospho-IκBα antibodies were purchased from Cell Signaling Technology (Beverly, MA, USA). Anti-phospho-p65, anti-p65, anti-survivin, anti-Bcl-2, anti-Bcl-xl, anti-COX-2, anti-VEGF, anti-MMP-9, anti-PARP, anti-Lamin B, and anti-β-actin antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Alexa Fluor® 594 donkey anti-rabbit IgG (H + L) antibody was obtained from Life Technologies (Grand Island, NY, USA). The FITC Annexin V Apoptosis Detection Kit I was purchased from (BD Biosciences, Becton-Dickinson, Franklin Lakes, NJ, USA).
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5

Inflammatory Response Modulation: A Comprehensive Protocol

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IL-1β (Pepro Tech, USA), Forskolin (APExBIO Technology, USA), SFN (APExBIO Technology, USA), Rat IL-1β ELISA Kit (Elabscience, China), Rat TNF-α ELISA Kit (Elabscience, China). For immunohistochemical and immunofluorescence analyses, the following antibodies were used: anti-BMAL1 (Abcam, #ab3350), anti-NRF2 (Proteintech, #16396-1-AP), anti-Aggrecan (Proteintech, #13880-1-AP), anti-MMP13 (Abcam, #ab39012), anti-p65 (Santa Cruz Biotechnology, #(F-6): sc-8008), anti-Phospho-p65(Santa Cruz Biotechnology, #(A-8): sc-166748), and GAPDH (Proteintech, #60004-1-lg). For immunohistochemical and immunofluorescence analyses, the following antibodies were used: anti-BMAL1 (Abcam, #ab3350), anti-NRF2 (Proteintech, #16396-1-AP), anti-Aggrecan (Proteintech, #13880-1-AP), anti-MMP13 (Abcam, #ab39012), and anti-p65(Invitrogen, PA5-16545).
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6

Airway Immune and Microbiome Analysis

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Five-micrometre serial sections were cut from each tissue specimen and haematoxylin and eosin, and Masson trichrome staining was performed. Additional serial sections were used for immunostaining with rabbit polyclonal anti-IgA (PAB9360, Abnova, Taipei City, Taiwan; 1:100) to detect SIgA on airway epithelial surface, rabbit polyclonal anti-neutrophil elastase (ab68672, Abcam; 1:200) to detect neutrophils, rabbit polyclonal anti-CD68 (ab125512, Abcam; 1:200) to detect macrophages, or rabbit polyclonal anti-phospho-p65 (Ser276, Santa Cruz Biotechnology; 1:100) to detect NF-κB pathway activation. Fluorescent in situ hybridization was performed using a probe for the conserved portion of prokaryotic 16S rRNA.
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7

Western Blot Analysis of Protein Expression

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After incubation under various experimental conditions, Western blot was implemented to identify the protein expression for the molecules of interest, as described in our previous publications [33 (link), 35 (link)]. Briefly, HASMCs were successively washed, scraped, collected, and lysed to obtain the lysates. The lysates were then centrifuged to yield the whole cell extract for further steps, sequentially including sample preparation, loading and running SDS-PAGE gel electrophoresis with 10% running gel, transferring the proteins from the gels to the nitrocellulose membranes, and immunodetection of proteins. For the final step, anti-β-actin, anti-IL-6, anti-TLR2, anti-TLR4, anti-GAPDH, anti-Gαs, anti-p47phox, anti-phospho-p65, anti-VCAM-1, anti-ICAM-1, anti-MMP-2, and anti-MMP-9 antibodies were purchased from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA). The membranes were incubated overnight at 4°C with these antibodies at a dilution of 1 : 1000 in TTBS, and the immunoreactive bands were then visualized by using secondary antibodies and enhanced chemiluminescence reagents.
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8

Investigating Cellular Signaling Pathways

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We purchased anti-Akt, anti-phospho-Akt, anti-mTOR, anti-phospho-mTOR, anti-MMP-2, anti-MMP-9, anti-GAPDH, anti-tissue inhibitor of matrix metalloproteinase (TIMP)-1, anti-TIMP-2, anti-phospho-c-Jun, and anti-phospho-p65 antibodies from Santa Cruz Biotechnology Inc (Santa Cruz, CA, USA). Surfactin and urban PM (SRM 1648a) were purchased from Sigma (St. Louis, MO, USA).
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9

Mechanistic Insights into Artocarpin-Mediated Apoptosis

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DMEM/F-12 medium, FBS, and Lipofectamine 2000 were obtained from Invitrogen (Carlsbad, CA, USA). Western blotting materials (Hybond C membrane, enhanced chemiluminescence (ECL) system and Hyperfilms) were purchased from GE Healthcare Biosciences (Buckinghamshire, UK). The monoclonal antibodies cytochrome C, Apaf-1, caspase 3 and anti-phospho p65 were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). PhosphoPlus p53, ERK1/2, p38 and Akt antibodies were obtained from Cell Signaling Technology (Danvers, MA, USA), and phosphoPlus p47phox antibody was purchased from Assay Biotechnology (Sunnyvale, CA, USA). GAPDH antibody was obtained from Biogenesis (Boumemouth, UK). c-Myc and Noxa were purchased from Calbiochem, San Diego, CA, USA. N-acetylcysteine (NAC), apocynin (APO), Bay117082, U0126, SB202190, SH-5, LY294002 and wortmannin were from Biomol (Plymouth Meeting, PA, USA). Artocarpin (purity > 98% by high performance liquid chromatography analysis) was obtained from Pulin Biotech Company Limited (Taipei, Taiwan).
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10

Protein Extraction and Western Blot Analysis

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hAF and hNP cells lysates were prepared using RIPA buffer (Biosesang, Seongnam, Korea) with protease inhibitor such as 1 M of PMSF (Roche, BS, Switzerland) and phosphatase inhibitor such as 0.2 mM of Na3VO4 (Sigma, MO, USA) and 10 mM of NaF (Sigma). Extracted total protein was evaluated using a bicinchoninic acid (BCA) assay. A sodium dodecyl sulfate (SDS) poly-acrylamide gel (10%) was loaded with 40 µg of total protein, followed by electrophoresis (SDS-PAGE). The resolved proteins were then transferred to polyvinylidene fluoride (PVDF) membranes (Bio-Rad, CA, USA), which were subsequently blocked with 5% skim milk or 3% BSA and incubated overnight at 4 °C with 5% BSA in TBST (Tris-buffered saline with 0.1% Tween 20) with the primary antibody. Immunolabeling was detected using ECL reagent (Invitrogen, MA, USA). The antibodies used for analysis were anti-phospho-p65, anti-p65, and anti-β-actin antibodies, which were purchased from Santa Cruz Biotechnology (1:1000; Dallas, TX, USA), and anti-phospho-p38 and anti-p38 antibodies were purchased from Cell Signaling Technology (1:1000; Danvers, MA, USA).
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