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Esi tof biopolymer analysis reference masses

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The ESI-TOF Biopolymer Analysis reference masses are a set of predefined mass standards used for calibrating and validating mass spectrometry instruments. These reference masses are designed to ensure accurate mass measurements for the analysis of biopolymers, such as proteins, peptides, and oligonucleotides.

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6 protocols using esi tof biopolymer analysis reference masses

1

Characterization of Biological Compounds

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Purified water was obtained by using a Milli-Q Integral 3 system (Millipore SAS, Molsheim, France). Zomepirac sodium salt (used as internal standard, IS), L-pyroglutamic acid, hypoxanthine, L-histidine monohydrochloride monohydrate, oleic acid, L(+) lactic acid, LS-MS grade acetonitrile, methanol, formic acid, and LC grade ethanol were purchased from Sigma-Aldrich Chemie GmbH (Steinheim, Germany). The API-TOF reference mass solution kit (G1969-850001) and tuning solutions, ESI-L low-concentration tuning mix (G1969-85000), and ESI-TOF Biopolymer Analysis reference masses (G1969-850003) were purchased from Agilent Technologies (Santa Clara, CA, USA).
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2

Mass Spectrometry Reagent Standards

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Purified water was obtained using the Milli-Qplus185 system (Millipore, Billerica, MA, USA). LC–MS grade methanol (MeOH), acetonitrile (ACN), formic acid and LC grade ethanol (EtOH), standard mix for GC–MS, containing grain fatty acid methyl ester mixture (C8-C28), 2-propanol and analytical grade heptane were purchased from Sigma-Aldrich ChemieGmbH (Steinheim, Germany). C18:0methyl ester and N,O-bis(trimethylsilyl) trifluoroacetamide with 1% trimethylchlorosilane were obtained from Pierce Chemical Co (Rockford, IL, USA). Silylation grade pyridine was purchased from VWR International BHDProlabo (Madrid, Spain). The API-TOF reference mass solution kit (G1969-850001) and tuning solutions, ESI-L low concentration tuning mix (G1969-85000) and ESI-TOF Biopolymer Analysis referencemasses (G1969-850003) were purchased from Agilent Technologies (Santa Clara, CA, USA).
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3

Preparation of LC-MS Grade Solvents

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Purified water was obtained using the Milli-Q Integral 3 system (Millipore SAS, Molsheim, France). LC-MS grade methanol, acetonitrile, formic acid and LC grade acetone, and ethanol were purchased from Sigma-Aldrich Chemie GmbH, Steinheim, Germany. The API-TOF reference mass solution kit (G1969-850001) and tuning solutions, ESI-L low concentration tuning mix (G1969-85000), and ESI-TOF Biopolymer Analysis reference masses (G1969-850003) were purchased from Agilent Technologies, Santa Clara, California, USA.
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4

Quantitative Lipidomic Analysis Protocol

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Blank samples included mixtures of methanol/ethanol (1:1) that were prepared in the same way as biological samples. Zomepirac sodium salt (used as the internal standard (IS), arachidonic acid, docosahexaenoic acid, lysophosphatidylethanolamine (LPE) 18:0, phosphatidylethanolamine (PE) 16:0/22:6, LS-MS-grade acetonitrile, methanol, LC-grade formic acid, and ethanol were purchased from Sigma-Aldrich Chemie GmbH (Steinheim, Germany). The API-TOF reference mass solution kit (G1969-850001) and tuning solutions, ESI-L low-concentration tuning mix (G1969-85000), and ESI-TOF Biopolymer Analysis reference masses (G1969-850003) were purchased from Agilent Technologies (Santa Clara, CA, United States). Purified water was obtained using the Milli-Q Integral three system (Millipore SAS, Molsheim, France) in order to prepare solution A.
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5

Mass Spectrometry Protocol for Metabolite Analysis

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Purified water was obtained using the Milli-Q Integral 3 system (Millipore SAS, Molsheim, France). Zomepirac sodium salt (used as an internal standard, IS), L-serine, L-arginine hydrochloride monohydrate, ascorbic acid, L-homoarginine hydrochloride, LC-MS grade methanol acetonitrile, formic acid and LC grade ethanol were purchased from Sigma-Aldrich Chemie GmbH (Steinheim, Germany). Pure p. a. ammonium solution (25%) was purchased from Avantor Performance Materials (Gliwice, Poland). The API-TOF reference mass solution kit (G1969–850001) and tuning solutions, ESI-L low concentration tuning mix (G1969–85000) and ESI-TOF Biopolymer Analysis reference masses (G1969–850003) were purchased from Agilent Technologies (Santa Clara, California, United States).
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6

Mass Spectrometry Protocol Optimization

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Purified water was obtained using the Milli-Q Integral 3 system (Millipore SAS, Molsheim, France). Zomepirac sodium salt (used as internal standard, IS), LS-MS-grade acetonitrile (ACN), methanol (MeOH), and formic acid (FA) were purchased from Sigma-Aldrich Chemie GmbH (Steinheim, Germany). Pure p.a. ammonium solution (25%) was purchased from Avantor Performance Materials (Gliwice, Poland). The API-TOF reference mass solution kit (G1969-850001) and tuning solutions, ESI-L low concentration tuning mix (G1969-85000), and ESI-TOF Biopolymer Analysis reference masses (G1969-850003) were purchased from Agilent Technologies (Santa Clara, CA, USA). Standards to confirm the identity of metabolites were purchased from Sigma-Aldrich Chemie GmbH (Steinheim, Germany) (taurine, pipecolic acid, leucine, histidine, phenylalanine, 3-methylhistidine, citric acid, tryptophan, adenosine, and stearoylcarnitine) and Avanti Polar Lipids Inc. (AL, USA) (LPI 18:0 and LPG 18:1).
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