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4 protocols using anti ripk1 610459

1

Immune Cell Marker Antibody Protocol

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Anti-RIPK3 (ab72106), anti-MLKL (ab184718), anti-pMLKL (ab187091), and anti-FOXp3 (ab20034) were purchased from Abcam (Cambridge, UK); anti-PD-L1 (E1L3N) was obtained from Cell Signaling Technology (Danvers, Massachusetts, USA); anti-RIPK1 (610459) was bought from BD Biosciences (San Jose, California, USA); anti-CD8 (M7103) was purchased from Dako (Agilent) (Santa Clara, California, USA); and anti-CD163 (NCL-L-CD163) was purchased from Leica Biosystems (Wetzlar, Germany).
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2

Immunoprecipitation and Immunoblot Analysis

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Immunoprecipitation and immunoblot analysis were performed as described previously35 (link). Briefly, the cells were treated as indicated and washed with cold PBS. The cells were harvested with lysis buffer (50 mM Tris-HCl (pH 7.5), 150 mM NaCl, 1.0% Triton X-100, 1 mM EDTA, and 10% glycerol containing protease inhibitors). Cell extracts were left on ice for 30 min and centrifuged at 13,000 r.p.m for 30 min. Cell lysates were incubated with 2μg of anti-RIPK1 antibody or 2μg of normal mouse IgG antibody (Santa Cruz) overnight at 4°C and then incubated with 15μl of protein A beads for an additional 3h at 4°C. The beads were washed with lysis buffer three times and then boiled in 20μl of 1×SDS loading buffer for 10 min. Samples were loaded on SDS-PAGE gels followed by electroblotting onto PVDF membranes (Millipore). To determine protein levels, immunoblot was performed using the following antibodies: anti-RIPK3 (2283) from Pro Sci; anti-pMLKL (ab196436) from Abcam; anti-RIPK1 (610459) from BD Biosciences; anti-pP38 (9211S), anti-JNK (9252), anti-pERK1/2 (4370), anti-pRIPK1 (S166) (31122S), anti-pJNK (9251) from Cell Signaling, anti-Tim23 (11123-1-AP) from Proteintech, anti-GAPDH (sc-32233) from Santa Cruz, and anti-TRIF (657102) from Biolegend.
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Exploring Cell Death Pathways

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Pan-caspase inhibitor, z-VAD-FMK (carbobenzoxy-valyl-alanyl-aspartyl-[O-methyl]- fluoromethylketone), GSK’782, and necrosulfonamide (NSA) were purchased from Calbiochem (Merck Millipore, Darmstadt, Germany). Gemcitabine and Necrostatin-1 (Nec-1) were from Sigma (St Louis, Missouri, USA). TNF-α was from R&D systems (Minneapolis, Minnesota, USA). Smac mimetic (SM-164) was a gift from S. Wang (University of Michigan, Ann Arbor, Michigan, USA). Antibodies for Western blot were obtained from commercial sources: anti-RIPK1 (610459) and anti-FADD (610400) were from BD Biosciences (San Jose, California, USA); anti-RIPK3 (8457), anti-cIAP1 (7065), anti-cIAP2 (3130), anti-NIK (4994), anti-cyclin D1 (2978), anti-caspase-8 (9746) and anti-actin (4970) were from Cell Signaling (Danvers, Massachusetts, USA); anti-MLKL (ab184718) and anti-phosphorylated MLKL (ab187091) were from Abcam (Cambridge, UK).
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4

Poly(I:C)-Induced Cell Death Analysis

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Poly(I:C) HMW was purchased from InvivoGen (San Diego, California, USA). Smac mimetic (SM-164) was a gift from S. Wang (University of Michigan, Ann Arbor, Michigan, USA). Pan-caspase inhibitor (z-VAD-FMK), GSK’782, necrosulfonamide (NSA), Bay11–7082, U0126, SP600125 and SB203580 were purchased from Calbiochem (Merck Millipore, Darmstadt, Germany). Necrostatin-1 (Nec-1) were purchased from Sigma (St Louis, Missouri, USA). TNF-α was purchased from R&D systems (Minneapolis, Minnesota, USA). TLR3 inhibitor (CuCpt4a) was purchased from APExBIO (Boston, Massachusetts, USA). Antibodies for Western blot were purchased from commercial available providers as following: anti-RIPK1 (610459) was from BD Biosciences (San Jose, California, USA); anti-TLR3 (6961), anti-RIPK3 (8457), anti-cIAP1 (7065), anti-cIAP2 (3130), anti-caspase-8 (9746), anti-caspase-3 (9662), anti-PARP-1 (9542) and anti-actin (4970) were from Cell signaling (Danvers, Massachusetts, USA); anti-MLKL (ab184718) was from Abcam (Cambridge, UK).
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