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4 protocols using pierce bca assay

1

Isolation and Characterization of Myelin-Derived Axon Growth Inhibitors

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CME was prepared from adult rat brains as described by us previously [21 (link)]. Briefly, brains were homogenised in sucrose/EDTA (Sigma, Poole, UK) and debris was clarified by centrifugation. The supernatant was layered on 0.9 M sucrose and centrifuged at 20,000 g for 60 min. The white material at the interface was collected and purified in 0.32 M sucrose solution and the white pellet was collected and freeze-dried overnight. The protein content of the CME was determined using the Pierce BCA assay (#5000001; BioRad, Watford, UK) and the content of myelin-derived axon growth inhibitory molecules such as myelin basic protein (#MCA409S; MBP; Serotec, Oxford, UK; 1:500 dilution), Nogo-A (#AB588; Sigma; 1:500 dilution), myelin-associated glycoprotein (#MAB1567; MAG; Sigma; 1:500) and the CSPG brevican (#SC-135849; Santa Cruz Biotechnology, Santa Cruz, CA, USA; 1:500 dilution) was determined by Western blot, as described below.
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2

Protein Concentration Determination

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Chemical reagents were purchased from Sigma Aldrich and ChemImpex. The Pierce BCA assay and the BioRad Bradford assay were purchased and utilized for protein concentration determination and a Thermo Fisher Scientific Nanodrop 2000 was utilized for protein absorbance measurements.
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3

Western Blot Analysis of Antioxidant Enzymes

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Samples were prepared by homogenizing ~ 50 mg of tissue in ~ 550ul (11ul:1 mg) RIPA for skeletal muscle and ~ 500ul (10ug:1 mg) RIPA for liver. RIPA contained protease and phosphatase inhibitor cocktail (Pierce). Tissue samples homogenized using a TissueLyserII (Qiagen) for 2 min at 30 Hz for skeletal muscle and 1 min at 30 Hz for liver. Supernatant after centrifugation was collected and protein measured using Pierce BCA assay (Bio-Rad).
Blotting was performed with Criterion TGX gels (Bio-Rad). Gels were transferred to PVDF membranes (Bio-Rad) and total protein measured with Ponceau S (Sigma) staining imaged with a Perfection V39 flatbed scanner (Epson). Membranes were blocked with 10% non-fat dry milk or 2% BSA in TBST. Membranes were incubated with primary antibody overnight at 4 °C with agitation: Akt (Cell Signaling, 9272), SOD2 (AbCam, ab13533), GPX4 (Santa Cruz Biotechnology, sc-27529), pAkt(S473) (Cell Signaing, 9271), GPX1 (AbCam, ab22604), HNE (Alpha Diagnostic, HNE11-S). Membranes were washed with TBST and incubated with HRP secondary (Santa Cruz Biotechnology) for 1 h at room temperature. Membranes were then washed and developed with Pierce ECL Plus Western Blotting Substrate (ThermoFisher). Membranes were imaged on a Typhoon FLA 7000 (Amersham). All quantifications were performed in ImageStudioLite (LI-Cor).
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4

Quantitative Western Blot Analysis

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Cellular protein was harvested in RIPA buffer (Millipore) containing complete mini protease inhibitors (Roche Ltd, Ireland). Protein concentration was quantified by Pierce BCA assay (Bio‐Rad Laboratories Inc., USA). Equal concentrations of lysate (10 μg) were separated by SDS‐PAGE, transferred to nitrocellulose membranes, blocked, and incubated overnight (at 4 °C) in primary antibody.7 Blots were probed with antibodies to ABCA1, ABCG1, SR‐BI (Novus Biologicals, UK, catalog no.:, NB400‐15, NBP2‐54682m, and NB400‐105, respectively), phosphorylated (P)‐STAT1, whole‐cell (WC)‐STAT1, P‐STAT3, WC‐STAT3, GAPDH, or β‐actin (Cell Signalling, MA, USA, catalog no.: 8826S, 14994S, 9145S, 12640S, 5174S, and 3700P, respectively). Blots were washed, incubated in secondary antibody, and visualized using Pierce ECL Western Blotting Substrate (Thermo Fisher Scientific Inc., USA). For densitometry analysis, bands were quantitated using Image J software and normalized to either GAPDH, β‐actin, or Ponceau at 70 kDa as indicated. Densitometry data are presented in Figures S3–S7, Supporting Information.
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