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Trypan blue solution

Manufactured by Merck Group
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Trypan blue solution is a laboratory reagent used for cell counting and viability assessment. It is a blue dye that selectively stains dead or dying cells, allowing them to be easily distinguished from viable cells under a microscope.

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510 protocols using trypan blue solution

1

Photodynamic Therapy Protocol using Zirconyl Chloride

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Zirconyl chloride (ZrOCl2, 8H2O), phosphoric acid and Methylene blue were obtained from Merck. DMEM medium (Dulbecco’s Modified Eagle Medium) was purchased from Invitrogen. MTT assay reagent, (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide), was supplied by Sigma-Aldrich. Trypan blue solution (0.4% w/v) and dimethyl sulfoxide (DMSO) were achieved from Merck Company. Fetal bovine serum (FBS) and antibiotics were purchased from Gibco (Gibco BRL). All chemicals were of analytical grade. Double distilled deionized water was used for all experiments and solutions. All pH measurements were made at 25 °C using Bel PHS3-BW (BEL ENGINEERING, Italy). The UV-Vis absorption spectra were recorded using Cary 60 UV/Vis spectrophotometer, equipped with quartz cells. Red light emitting LED (660 nm; power density: 30 mW cm−2) was used as light source for photodynamic experiments.
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2

Cell Migration and Invasion Assay

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A total of 8 × 104 cells were plated in the upper chamber of cell culture inserts (Falcon, 353495) coated with (for the invasion assay) or without (for the migration assay) Matrigel (Corning, Corning, NY, USA) and incubated at 37 °C in 5% CO2 for 24 h. The migrated cells retained on the bottom surface of the membrane were fixed and stained with trypan blue solution (Merck, Branchburg, NJ, USA). The nonmigrated cells were scraped from the upper surface of the membrane using a cotton swab. The cells were photographed and quantified using ImageJ software.
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3

Antioxidant Compounds and Cell Viability

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RT112 and J82 cell lines from ATCC were available at the Institute of Food Science, Avellino, Italy; Roswell Park Medium Institute (RPMI) and Minimum Essential Medium Eagle (EMEM) medium, fetal bovine serum (FBS), L-glutamine 200 mM, penicillin 5000 IU/mL/streptomycin 5000 μg/mL, and PBS (phosphate buffer saline) were purchased from Lonza (Euroclone SPA, Pero, Italy); Crystal Violet, trypan blue solution (0.4% v/v), RNase A, propidium iodide, quercetin, rutin, myricetin, gallic acid, kaempferol and dimethylsulfoxide (DMSO) were from Merck Life Science (Milano, Italy). Glutathione (GSH); phtaldialdehyde, 2′,7′-dichlorofluorescein diacetate (DCFH-DA), N-acetyl-L-cysteine (NAC), L-Buthionine-sulfoximine (BSO) were from Carlo Erba (Milan, Italy). Reagents for Folin–Ciocalteau were purchased from Merck Life Science (Milan, Italy). Methanol, water (HPLC-grade), and trifluoroacetic acid were purchased from Merck-Schuchardt (Hohenbrunn, Germany). Hydroxytyrosol, tyrosol, oleocanthal, oleuropein aglycone, and ligstroside aglycone analytical standards were purchased from Merck-Schuchardt (Hohenbrunn, Germany).
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4

Apoptosis-related Protein Expression Analysis

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RG-7112 was purchased from Selleck (Houston, TX, USA) and dissolved in DMSO to prepare a 5 mM stock solution. Propidium iodide (PI) and Hoechst33342 were purchased from Thermo Fisher Scientific (Waltham, MA, USA). Trypan blue solution (0.4%) was obtained from Merck KGaA (Darmstadt, Germany). Antibodies against SOX2 (MAB2018) and MDM2 (AF1244) were purchased from R&D Systems (Minneapolis, MN, USA). An antibody against β-actin (A1978) was purchased from Merck KGaA. Antibodies against GAPDH (#5174), cleaved caspase-3 (#9661), cleaved PARP (#9541), survivin (#2808), Noxa (#14766), BID (#2002), Bax (#5023), c-IAP1 (#7065), c-IAP2 (#3130), XIAP (#2045), and Puma (#12450) were purchased from Cell Signaling Technology, Inc. (Beverly, MA, USA). Antibodies against p53 (sc-126), Bcl-2 (sc-7382), and Mcl-1 (sc-20679) were purchased from Santa Cruz Biotechnologies (Dallas, TX, USA). An antibody against Bcl-XL (10783-1-AP) was purchased from ProteinTech (Rosemont, IL, USA).
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5

Molecular Signaling Pathway Inhibitors

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CEP-1347 was purchased from TOCRIS Bioscience (Bristol, UK). Gö6976, Crystal Violet (C.I. 42555), and Trypan Blue solution (0.4%) were obtained from Merck KGaA (Darmstadt, Germany). Propidium iodide and Hoechst33342 were supplied by Thermo Fisher Scientific (Waltham, MA, USA). An antibody against MDM4 (A700-000-T) was purchased from BETHYL (FORTIS LIFE SCIENCES, Waltham, MA, USA). An antibody against MDM2 (AF1244) was purchased from R&D Systems (Minneapolis, MN, USA). A p53 antibody (sc-126) was from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA, USA). Antibodies against GAPDH (#5174), p21 Waf1/Cip1 (cyclin-dependent kinase inhibitor 1A, CDKN1A) (#2947), Myristoylated alanine-rich protein kinase C (PKC) substrate (MARCKS) (#5607), Phospho-MARCKS (Ser152/156) (#2741), Phospho-PKC (pan) (βII Ser660) (#9371), Phospho-PKCα/β II (Thr638/641) (#9375), Phospho-PKCδ (Thr505) (#9374), and Phospho-PKCθ (Thr538) (#9377) were from Cell Signaling Technology, Inc. (Beverly, MA, USA).
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6

Cell Viability Assay Using Trypan Blue

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Suspended cells were mixed with trypan blue solution (Merck KGaA), and unstained (alive) and blue (dead) cells were counted on a hemocytometer (ERMA) as previously described (38 (link)).
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7

Baicalein Cytotoxicity Assay in A549 Cells

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A549 cells were cultured in 24-well cell culture plates under standard conditions for 24 h. Cells were treated with various concentrations (1-800 µM) of baicalein in duplicate. At 24 h after treatment, cells were visualized under an inverted microscope prior to harvesting cells by brief trypsinization with 0.25% trypsin/0.1% EDTA. Harvested cell suspensions were then mixed with 0.4% trypan blue solution (Merck KGaA, Darmstadt, Germany) in PBS. Live and dead cells were counted using a hemocytometer.
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8

Trypan Blue Cell Viability Assay

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Trypan Blue solution (T8154, Merck KGaA) was used to assess the numbers of viable and dead cells [20 (link)]. Adherent and non-adherent cells in culture dishes were collected, centrifuged, resuspended in PBS, and stained with Trypan Blue solution (final, 0.2%) for 1 min. A hemocytometer identified viable and dead cells based on their ability and inability, respectively, to exclude trypan blue.
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9

Cellular Growth and Cell Cycle Dynamics

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Cell growth was determined by direct counting of trypan blue-excluded cells. Either WT (Asxl1+/+) or mutant (Asxl1−/−) MEFs, isolated from E13.5 (passage 5), were seeded in 60-mm culture dishes at a density of 5 × 104 cells per well and cultured for 5 days in media containing 10.0% or 0.1% FBS. Cells were stained with 0.4% trypan blue solution (Merck Millipore, Darmstadt, Germanyand counted daily under a light microscope. The cell cycle profile was assessed by flow cytometry using 1 × 106 cells. Briefly, cells were fixed in 80% ethanol, stained with propidium iodide (PI) solution (Sigma-Aldrich), and analyzed for cell cycle progression using the FACSCalibur Flow cytometer and CellQuest software (BD Biosciences, San Jose, CA).
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10

Proliferation Assay of Sca1+/CD31- SP-CPCs

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1 × 104 Sca1+/CD31 SP-CPCs were seeded (≈500 cells/cm2) with EM1 and EM2. Proliferation was assessed at day 3 and 5 for EM1, and day 4 and 7 for EM2 by cell counting using a Neubauer chamber. Trypan Blue Solution (#T8154; Merck) was used to exclude dead cells.
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