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Ni nta

Manufactured by Merck Group
Sourced in Germany, United States

Ni-NTA is a nickel-nitrilotriacetic acid (Ni-NTA) agarose resin used for the purification of recombinant proteins. It utilizes the high-affinity interaction between the nickel ions and histidine-tagged proteins to selectively capture and purify the target proteins from complex mixtures.

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5 protocols using ni nta

1

Purification of Viral Proteins from Infected Cells

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High Five cells were grown to 5⋅106 cells/ml and 5 ml were mixed with 5 ml of fresh medium supplemented with penicillin and streptomycin and infected by addition of 200 μl of P2 virus. Cells were harvested after 40 h, pelleted. and lysed by sonication in lysis buffer (50 mM HEPES pH 7.4, 200 mM NaCl, 0.1% Triton X-100, 0.2 mM TCEP). Lysate was cleared by centrifugation (13200 rpm at 30 min, 4°C). 25 μl Ni-NTA (Sigma-Aldrich) or 15 μl Strep-Macro-Prep (IBA AG) were added and sample was incubated on a shaking platform at 4°C for 30 min. After two washes with lysis buffer, the resin was resuspended in SDS-PAGE sample buffer and analyzed by SDS-PAGE.
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2

Recombinant Expression and In Vitro Cleavage of Taspase1

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The cDNA of human Taspase1 was cloned into the pET22b expression plasmid and recombinantly expressed in E. coli strain BL21* (Invitrogen, Darmstadt, Germany). An appropriate MLL substrate was constructed by cloning a cDNA fragment of MLL comprising amino acids 2614–2773 into the pGEX-5T expression vector. The resulting GST–MLL fusion protein (p50) exhibits the CS1 (QVD·GADD) and CS2 (QLD·GVDD) sites for hydrolysis by Taspase1. Expression of the C-terminal His-tagged Taspase1 protein and the N-terminal His-tagged GST–MLL fusion protein (p50) was induced by adding 1 mM IPTG for 4 h, followed by Ni-NTA affinity-purification following the instructions of the manufacturer (Sigma, Munich, Germany). For in vitro cleavage assays, equal amounts of purified Taspase1 and GST–MLL substrate protein (~ 0.5 μg protein) were co-incubated in incubation buffer containing 40 mM Hepes/KOH pH 7.9, 10 mM KCl and 5 mM MgCl2 for 30 min at 37 °C. Enzyme, substrate and hydrolyzed products were separated on a 12% SDS-PAGE and Coommassie blue-stained for visual inspection.
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3

Soluble, Disulfide-Stabilized H7 HA Trimer Production

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Soluble, disulfide-stabilized, fully cleaved H7 HA trimers were produced by transient co-transfection of plasmids encoding H7 HA (H7 SH13 DS2 6R) and Furin of Expi293F cells (Life Technologies) using Turbo293 transfection Reagent (Speed biosystem). After 5 days at 37 °C, culture supernatants were harvested by centrifugation and concentrated 5-fold by Tangential Flow Filtration. The recombinant HA trimer was captured by Ni-NTA (Sigma-Aldrich) through a C-terminal 6xHis-tag. The imidazole eluant was combined 1:1 (v/v) with saturated ammonium sulfate, centrifuged at 4 °C, and pellet removed. The supernatant was dialyzed against 500 mM NaCl, 50 mM Tris pH 8, and purified by size exclusion chromatography on a Superdex 200 Increase 10/300 GL column (Cytiva).
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4

Purification of Recombinant Creatine Kinase

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E. coli NiCo21(DE3), transformed with wildtype rmCK (wt-rmCK) and rmCK mutant expression plasmids as described above, were shaken in terrific broth (TB)-medium (in-house preparation) at 37 °C. Expression was induced by adding 1 mM isopropyl ß-D-1-thiogalactopyranoside (Sigma-Aldrich, Taufkirchen, Germany). Three hours after induction, bacterial cells were harvested by centrifugation. Wt-rmCK and mutant proteins (Met70Ala, Met179Leu, Met70Ala/Met179Leu) were purified from the soluble fraction by Ni–NTA (nickel-nitrilotriacetic acid) affinity chromatography (Sigma-Aldrich). The N-terminal His6-fusion tag was removed by cleavage with tobacco etch virus (TEV) protease (in-house preparation) and wt-rmCK and mutant proteins were subsequently further purified to apparent homogeneity using size exclusion chromatography. The different rmCK proteins were lyophilized for storage.
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5

SPIO-COOH Nanoparticle Conjugation

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Carboxyl SPIOs (SPIO‐COOH, core diameter = 5 nm) was purchased from Ocean Nanotech (Springdale, AR). Hexa‐histidine peptide was purchased from GeneScript (Springdale, AR, USA). 1‐Ethyl‐3‐(3‐dimethylaminopropyl)‐carbodiimide (EDC), sulfo‐N‐hydroxysuccinimide (sulfo‐NHS) and Ni‐NTA were purchased from Sigma‐Aldrich (St. Louis, MO, USA).
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