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61 protocols using enhanced chemiluminescent reagent

1

Immunoblotting Analysis of BMSCs under IL-17 and TNFα

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For immunoblotting analysis, BMSCs incubated with 50 ng ml–1 IL-17 for 15, 30, and 60 min or 10 ng ml–1 TNFα for 7.5, 15, 30 min were pre-challenged by 100 nM RA for 6 h. Cells were washed with ice-cold PBS, harvested and lysed for 15 min by lysis buffer containing 0.5% TritonX-100 (T9284, Sigma), 20 mM Hepes pH7.4 (H-4034, Sigma), 150 mM NaCl (A100241, Sangon Biotech), 12.5 mM β-glycerophosphate (A500486, Sangon Biotech), 1.5 mM MgCl2 (M4880, Sigma), 2 mM EGTA (A600077, Sangon Biotech), and a cocktail of protease inhibitors, Na3VO4 (A600869, Sangon Biotech), NaF (A500850, Sangon Biotech), and PMSF (A610425, Sangon Biotech). Equal amounts of protein extracts were resolved in 10% SDS-PAGE and transferred to PVDF membranes (IPVH00010, Merck Millipore). The membranes were blocked with 5% non-fat milk in Tris-buffered saline with Tween-20 (TBST, pH 7.6) for 1 h at room temperature before incubated overnight with the primary antibodies (p65 1:1,000, pp65 (Ser536) 1:1,000, IκBα 1:1,000, pIκBα (Ser32) 1:1,000, β-actin 1:1,000) at 4°C and then incubated with the secondary antibodies (rabbit, 1:10,000, W401B, Promega) for 1 h at room temperature. Finally, the blots were detected by enhanced chemiluminescent reagents (Millipore).
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2

Naringenin Modulates Th17 Cell Differentiation

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Naive CD4+ T cells were cultured with anti-CD3/CD28 and TGF-β with/without IL-6 in the presence/absence of naringenin for the time as indicated in the result section. Cells were harvested at 3 × 106 cells/50 μl into RIPA cell lysis buffer containing 50 mM Tris-HCl (pH 7.4), 150 mM NaCl, 1% NP40, 1 × protease inhibitor cocktail (Roche Applied Science, Indianapolis, IN), and 1 × phosphatase inhibitor cocktail (Sigma-Aldrich), and incubated on ice for 15 min. Total cell protein extract was resolved in 7.5% acrylamide gels and then transferred to nitrocellulose membranes. The membrane was blocked with 5% non-fat milk in Tris-buffered saline before being incubated, respectively with specific primary antibodies for the following proteins: STAT-3(1:1000), Smad2/3 (1:1000), phosphorylated Smad2/3 (p-Smad2/3) (1:1000), Acetyl-STAT3 (Lys685, Ac-STAT3) (1:1000), phosphorylated STAT3 (p-STAT3) (1:1000) (all from Cell Signaling Technologies, Danvers, MA), and β-actin (1:5000, Sigma-Aldrich). The membranes were next incubated with horseradish peroxides (HRP)-conjugated secondary antibodies followed by exposure to enhanced chemiluminescent reagents (Millipore, Burlington, MA).
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3

Protein Extraction and Western Blot Analysis

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Total proteins were extracted using RIPA lysis buffer (Beyotime Biotechnology, Shanghai, China) supplemented with phenylmethylsulfonyl fluoride (PMSF) (Beyotime), and the protein concentration was determined with a BCA protein assay kit (Beyotime). The lysates were separated by SDS‐PAGE (Bio‐Rad, CA, USA) and transferred to PVDF membranes (Millipore Sigma, USA), which were blocked with 5% nonfat dry milk (Bio‐Rad) at RT for 1 hr before they were incubated with primary rabbit antibodies against p53 (1:1000; 1C12; CST), p21 (1:1000; EPR3993; Abcam), p16 (1:1000; EP1551Y; Abcam), β‐actin (1:1000; 2D4H5; Proteintech), CLDN3 (1:1000; AG9411; Abcam), CDH4 (1:500; Proteintech), ITGAM (1:1000; AG16327; Proteintech), and α‐Klotho (1:500; AG27759; Proteintech and 1:500; EPR6856; Abcam) overnight at 4℃. The membranes were washed and then incubated with horseradish peroxidase‐conjugated secondary rabbit antibodies (1:10,000; Proteintech) at RT for 1 hr. Protein bands were developed by enhanced chemiluminescent reagents (Millipore Sigma), and images were captured and analyzed with a Vilber Fusion image system (Fusion FX5 Spectra, France).
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4

Protein Extraction and Western Blot Analysis of VSMCs

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Individual groups of VSMCs were harvested and lysed in RIPA (Radio Immunoprecipitation Assay) buffer containing protease inhibitor cocktail (Roche, Basel, Switzerland), followed by centrifuging. Furthermore, the nuclear and cytoplasmic cellular proteins were extracted using the nuclear and cytoplasmic protein extraction kit (Beyotime, Nantong, China). After quantification of protein concentrations, the cell lysate or protein samples (20 μg/lane) were separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS‐PAGE) on 8% to12% gels and transferred to polyvinylidene difluoride membranes (Millipore, Bedford, MA). The membranes were blocked with 5% non‐fat dry milk in TBST and incubated with primary antibodies overnight at 4°C. The primary antibodies included rabbit anti‐β‐actin, anti‐LAMIN B1 (Cell Signaling Technologies, Beverly, MA), rabbit anti‐NLRP3, anti‐caspase‐1, anti‐LXRα, anti‐ABCA1 (Sigma‐Aldrich), rabbit anti‐HMGB1 (Abcam, MA) and rabbit anti‐CD36 (Abcam, MA). After being washed, the bound antibodies were detected with horseradish peroxidase (HRP)‐conjugated anti‐rabbit IgG and visualized using the enhanced chemiluminescent reagents (Millipore). The relative levels of target protein to the control β‐actin or LAMIN B1 expression were determined by densitometric analysis using a GE ImageQuant Las 4000 mini.
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5

Western Blot Analysis of LPS-Stimulated Macrophages

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After being pretreated with ISE, RAW264.7 macrophages were stimulated with LPS or L1CM for 30 min, and then harvested in RIPA lysis buffer containing 50 mM Tris-HCl (pH 7.4), 150 mM NaCl, 1% NP40, 1 × protease inhibitor cocktail (Roche Applied Science, Indianapolis, IN), and 1 × phosphatase inhibitor cocktail (Sigma-Aldrich). Proteins were resolved in 7.5% acrylamide gels and then transferred to nitrocellulose membranes. The membrane was blocked with 5% non-fat milk in Tris-buffered saline before being incubated, respectively with specific primary antibodies for the following proteins: IκB-α (1:1000), phosphor-p44/p42 (Thr202/Tyr204) (p-ERK) (1:1000), phosphor-p38 (Thr202/Tyr204) (p-p38) (1:1000), and Phospho-SAPK/JNK (Thr183/Tyr185) (p-JNK) (1:1000), phosphor-STAT3 (p-STAT3) (1:1000), ERK (1:1000), JNK (1:1000), p38 (1:1000), STAT3 (1:1000) (all from Cell Signaling Technologies, Danvers, MA), and β-actin (1:5000, Sigma-Aldrich). The membranes were next incubated with horseradish peroxides (HRP)-conjugated secondary antibodies followed by exposure to enhanced chemiluminescent reagents (Millipore, Burlington, MA).
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6

Western Blot Analysis of PI3K/AKT Pathway

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Total protein was extracted using radioimmuno-precipitation assay (RIPA) lysis buffer (Beyotime, Shanghai, China). Then, a bicinchoninic acid (BCA) kit was used to quantify protein concentration and separated by gel electrophoresis (Beyotime). The loading volume was 20 μg. Following this, protein samples were transferred onto membranes. Membranes were sealed with bovine serum albumin (BSA) (Beyotime) for 1 h and incubated with primary antibodies at 4 °C overnight, followed by incubation with secondary antibody (1:2000, ab9485, Abcam) for 1 h. Protein bands were subsequently detected using enhanced chemiluminescent reagents (Millipore). Protein expression was quantified using ImageJ software, with GAPDH serving as the loading control. The primary antibodies used were as follows: anti-PI3K (human and mouse; dilution: 1:1000; catalogue number: ab151549, Abcam, UK), anti-p-PI3K (human and mouse; dilution: 1:1000; catalogue number: ab182651, Abcam), anti-AKT (human and mouse; dilution: 1:500; catalogue number: ab8805, Abcam), anti-p-AKT (human and mouse; dilution: 1:500; catalogue number: ab38449, Abcam), and anti-GAPDH (human and mouse; dilution: 1:3000; catalogue number: AF7021, Affinity, USA).
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7

Western Blot Protein Analysis of Cultured Cells and Tumor Tissues

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The total cellular proteins from cultured cells and tumor tissues were isolated by radioimmunoprecipitation assay buffer supplemented with protease inhibitor cocktail. Subsequently, 20 μg of protein sample was separated on sodium dodecyl sulfate-polyacrylamide gel electrophoresis and polyvinylidene difluoride membranes (Millipore, Billerica, MA, USA). After with 5% non-fat milk blocking, primary antibody incubation, and secondary antibody incubation, membranes carrying protein blots were visualized by Enhanced Chemiluminescent reagents (Millipore). The band density was quantified using image J software and normalized to glyceraldehyde-phosphate dehydrogenase (GAPDH) and indicated control groups. The primary antibodies included anti-Cyclin D1 (#55,506, 1:1000 dilution), anti-MMP-9 (#3852, 1:1000 dilution), anti-Vimentin (#3932, 1:1000 dilution), anti-TLN1 (#4021, 1:1000 dilution) and anti-GAPDH (#97,166, 1:1000 dilution) were provided by Cell Signaling Technology (Beverly, MA, USA).
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8

Immunoprecipitation and Western Blot Analysis

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Cells were lysed, and proteins were extracted and quantified. The cell lysates were incubated with specific antibodies or the anti-IgG control for 3–4 h at 4 °C with rotation. Then, samples were incubated with protein A/G agarose beads (Santa Cruz Biotechnology, Santa Cruz, CA, USA) overnight at 4 °C with rotation. The beads were pelleted using centrifugation at 1000× g for 30 s at 4 °C; then, they were boiled for 10 min at 95 °C and resolved with 10% SDS-polyacrylamide gel electrophoresis. The separated proteins were transferred to PVDF membranes (Millipore, Bedford, MA, USA), and the membranes were blocked in 5% skim milk and incubated overnight at 4 °C with anti-AHNAK or anti-IGF-1R at a dilution of 1:200. After washing with TBST, the membranes were incubated with a horseradish peroxidase-conjugated secondary antibody for 1 h at room temperature. Finally, the membranes were incubated with enhanced chemiluminescent reagents (Millipore) and exposed to autoradiography film in the dark.
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9

Immunoprecipitation and Western Blot Analysis of IgA

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CHO culture supernatant (1 mL) was incubated with rabbit anti-human α-chain-specific antibody (30 μL, Sigma-Aldrich) overnight at 4°C. Protein-A sepharose (50 μL, Sigma-Aldrich) equilibrated in PBS was added and the mixture incubated for 4 h at 4°C then centrifuged (3000 ×g, 4°C, 1 min). The resulting pellet was washed three times with 1 mL of PBS. The immunoprecipitated protein was separated by reduced or nonreduced SDS-PAGE, and then transferred to polyvinylidene difluoride membranes. Membranes were blocked overnight at 4°C by incubating with 10% skim milk in PBST, then incubated for 2 h at 37°C with the following primary antibodies, respectively: mouse anti-human IgA, α-chain specific (1 : 3000; Abcam, Cambridge, MA, USA); mouse anti-human, κ-chain specific (1 : 3000; Sigma Aldrich); mouse anti-human, J chain specific (1 : 2500; Abcam); and mouse anti-human, SC specific (1 : 3000; Sigma Aldrich). Bound antibodies were detected with an HRP-conjugated goat anti-mouse IgG (1 : 3000; Sigma Aldrich) in combination with enhanced chemiluminescent reagents (Millipore, Bedford, MA, USA).
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10

Apoptosis Protein Expression Analysis

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The cellular proteins were extracted from 107 cultured cells after drug treatments using RIPA lysis buffer (Promega, USA). Western blotting analysis was performed to determine cellular responses targeting apoptosis-related proteins including Bcl-2 and Bax. Briefly, C6 and U-87MG cells were treated with different doses of DMAMCL for 24 hr at 37°C. Then cells were washed twice with cold phosphate buffered saline (PBS) and lysed in RIPA buffer containing 1mmol/l PMSF (Pheylmethylsulfonyl fluoride, Sigma, USA) on ice for 30 min. The total proteins of cells were obtained by centrifugation at 12000 rpm for 15 min. Next, the lysate proteins were resolved by SDS-PAGE and transferred to the Immobilon-P membranes (Millipore, Billerica, MA, USA). The membranes were blocked by 5% nonfat milk in Tris-buffered saline with 0.1% Tween 20 (TBST) and immunoblotted with the antibodies against β-actin, Bcl-2 and Bax (Cellsignaling Technology, USA) at 4°C overnight. Then membranes were incubated with HRP-conjugated secondary antibody for 1.5 hr at room temperature. The targeting antibodies were stained with enhanced chemiluminescent reagents (Millipore, Billerica, MA, USA) and visualized by ChemiScope 3600 Mini systerm (Clinx Science Instruments, China).
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