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Celltracker green

Manufactured by Thermo Fisher Scientific
Sourced in United States, United Kingdom, Germany, France

The CellTracker Green is a fluorescent dye that can be used to label and track living cells. It is a membrane-permeable dye that becomes fluorescent upon entering cells, allowing for the visualization and tracking of cell populations.

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275 protocols using celltracker green

1

3D Cell Culture and Microscopy

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Cells were cultured within Col-I gels (250 cells/gel) for 7 days in 24-well glass-bottom culture plates (MatTek, Ashland, MA, USA). Staining with CellTracker™ Green (ThermoFisher, Waltham, MA, USA) was performed as previously described (Ueda et al., 2004 (link)). Briefly, gels were washed twice with serum-free media and incubated for 45 min with 25 µm CellTracker™ Green (ThermoFisher, Waltham, MA, USA) in a CO2 incubator. Next, gels were washed with serum-free media and incubated with complete media in a CO2 incubator until analysis. Confocal reflectance microscopy was performed as described (Kraning-Rush et al., 2012 (link)). Briefly, images were acquired on an Axio Observer.Z1 inverted microscope with LSM 700 (Carl Zeiss, Oberkochen, Germany) in a 5% CO2 atmosphere and 37 °C humidified environment. Samples were illuminated through an 80/20 dichroic mirror with 405 nm laser and a LD- C-Apochromat 40x/1.1 NA water immersion objective. Cells were imaged with a 488 nm laser. Z-stacks (0.31 µm × 0.31 µm × 0.95 µm; xyz) were acquired in the center/middle of the gels. Cells were later manually segmented in Fiji.
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2

Induction of Jurkat Cell Apoptosis

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Treatment with anti-CD95 (1 μg/ml) induced Jurkat cells to become apoptotic after 18 h in culture with serum free RPMI (supplemented with 2 mM l-glutamine, 100 U/ml penicillin, and 100 μg/ml streptomycin). At this point 80% were AnV+ve. Cells used in phagocytosis or interaction assays were labeled with cell tracker green (Molecular Probes) prior to induction of apoptosis.
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3

Matrigel Invasion Assay for HepG2 and Hep3B Cells

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Invasion assay was performed according to our published protocol with modification [75 (link)]. Specifically, 24-well Plate invasion chambers were pre-coated with Matrigel (Corning, Corning, NY, USA). HepG2 or Hep3B cells (5 × 104), after receiving indicated treatment for 2 days, were re-suspended in 0.5 ml of serum-free medium and loaded to the upper chamber while the lower chamber was filled with 0.5 ml of complete medium containing FBS, which served as a chemo-attractant. After 16 hr of incubation at 37°C, cell ability to penetrate the extracellular matrix (ECM) was assessed by staining the cells on the lower surface of the membrane with CellTracker™ Green (Molecular Probes, Eugene, OR, USA). Four fields of cells were counted randomly in each well under a fluorescent microscope at 200× magnification. Data are normalized to control treatment, which is set as 1, and are expressed as mean ± SEM of three independent experiments.
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4

Characterization of Heteromeric Connexin Channels

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HeLa cells transfected with rat Cx43 containing a carboxyl terminal (His)6 epitope, with chicken Cx45, or with both connexins have been described and characterized previously [Cx43: Accession X06656M19317; Cx45 Accession NM 205503(Martinez et al., 2002 (link))]. HeLaCx43 or HeLaCx45 cells were co-cultured at a ratio of 1:1 with the co-transfected HeLaCx43/Cx45 cells allowing the formation of mono-heteromeric channels with Cx43 (MhetCx43) and Cx45 (MhetCx45) homomeric connexons, respectively. In this manuscript, we will refer to rat Cx43(His)6 and chicken Cx45 as Cx43 and Cx45. Rat (Rattus norvergicus) Cx43 and chicken (Gallus gallus) Cx45 present 83% identity. The main differences are located at the intracellular loop and at the CT domain. The first extracellular loops have 100% identity. The second extracellular loops have 85% identity, with no differences in critical residues relevant for stabilization of docking connexons. For discrimination under epifluorescence microscopy, co-transfected cells expressing the heteromeric connexons were stained with 100 μM DiI Red (Molecular Probes Inc. D-282), while cells that expressed Cx45 or Cx43 were loaded with 50 μM Cell Tracker Green (Molecular Probes Inc. C-2925), both for 50 min at 37°C. To identify injected cells after fixation, cells were plated on coverslips with a central etched grid (Cell-Locator, CA).
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5

Fluorescent Labeling Reagents for Microscopy

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Rhodamine Lens Culinaris Agglutinin and VectaShield with DAPI were obtained from Vector Laboratories (Burlingame, CA). Fluospheres, Quant-iT pico green, Cell Tracker green and Texas Red-conjugated bovine serum albumin (BSA) were obtained from Molecular Probes (Eugene, OR). Fucoidin was obtained from Sigma Chemical Company (St. Louis, MO).
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6

Quantifying Leishmania Infection in Macrophages

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Macrophages (∼2.5×106 cells) were incubated the day before the experiment for 1 h at 37°C with stationary phase Leishmania promastigotes (ratio 20:1, parasites/macrophages). Non-internalized parasites were then removed by excessive washing, fresh medium was added and the incubation was continued for 1–3 days. At the end of the incubation period, the macrophages were washed twice with PBS and lysed with 0.01% (v/v) SDS in PBS (30 min, RT), to release internalized parasites. Broken macrophages were removed by centrifugation (250 g, 5 min). The parasites in the supernatant were collected by centrifugation (2000 g, 10 min) and labelled [30 min, room temperature (RT)] with Cell Tracker Green (CMFDA, Molecular Probes®; 5 μM in PBS). Finally, the cells were washed with PBS and analysed by FACS (FACS Calibur, BD Biosciences). To define the population of apoptotic/necrotic cells incorporating CMFDA, the parasites were treated with 4 mM H2O2 for 12 h before labelling [39 (link)]. On the basis of this analysis the histogram gates for live or apoptotic/necrotic cell population were set as M3 and M2 respectively.
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7

HSV-Activated PBMC Cytotoxicity Assay

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Healthy donor PBMCs were activated with HSVGM-CSF overnight at the indicated concentrations, and their ability to kill melanoma cell targets (with or without VPA treatment) stained with Cell Tracker Green (Molecular Probes) was determined using standard 5-h co-culture. Co-cultures were washed and stained for viability using a live-dead fixable dead cell stain (Thermo Fisher Scientific) before analysis using an Attune flow cytometer.
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8

Tracking Antigen-Presenting Dendritic Cells

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24 hours following culture with ovalbumin or immune-complexed ovalbumin, 5 ×106 bone marrow derived DCs were washed in PBS to remove non-internalised ovalbumin or immune complexes, and injected subcutaneously in the flank or footpad (depending on the lymph node harvested). 48 hours following transfer, lymph nodes were harvested and processed for histological examination or flow cytometric analysis. Cells were labelled with Cell Tracker Orange (Invitrogen Molecular Probes) or Cell tracker Green (Invitrogen Molecular Probes) as indicated in figure legends.
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9

Bioinks for 3D Printed Tissue Constructs

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P4-P6 human dermal fibroblasts (Cell Applications, Inc.) and human umbilical vein endothelial cells (Lonza Inc.) were incorporated into 5 w/v% gelatin or 3 w/v% fibrinogen at PEGX ratios of 0.1 and 0.2 respectively. Cell homogeneity throughout the bioink was assessed by sequentially collecting extruded bioink into tared microtubes. Wet weight was collected, gels were degraded with proteinase K (Sigma), and the solutions were analyzed for DNA content by the Picogreen assay (Life Technologies) using a microplate reader. Cell viability was assessed with the Live/Dead® assay (Life Technologies) according to manufacturer’s instructions. P4-P6 bone marrow-derived human mesenchymal stem cells (Lonza, Inc.) were seeded onto HUVEC encapsulated PEG-gelatin printed constructs. HUVECs and hMSCs were labeled with CellTracker Red (Molecular Probes®) and CellTracker Green, respectively according to manufacturer’s instructions. Cells were imaged with a Nikon C2+ confocal and Nikon AZ 100 fluorescent stereoscope.
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10

In vitro Microglial Migration Assay

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Migration of microglia in vitro was determined using Boyden Chambers (Millipore) as previously described [24 (link),25 (link)]. Rat primary microglia was pretreated with Tat (200ng/ml) for 24hrs, collected and washed with PBS and fluorescently labeled with 10μM cell tracker green (Molecular Probes, Eugene, OR) for 10min at 37°C. Labeled cells (2×105 cells) were added to the upper compartment of transwell inserts in serum-free medium. CX3CL1 was placed in the lower chamber. The transwell plates were incubated for 6h at 37°C followed by quantification of microglial migration by measuring the number of migrated cells following detachment of cells from the insert using a Synergy Mx fluorescence plate reader (BioTek Instruments, Winooski, VT, USA).
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